| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115353060
Identifier: 115353060
GI number: 115353060
Start: 3328253
End: 3328459
Strand: Direct
Name: 115353060
Synonym: Bamb_3009
Alternate gene names: NA
Gene position: 3328253-3328459 (Clockwise)
Preceding gene: 115353059
Following gene: 115353062
Centisome position: 93.58
GC content: 74.4
Gene sequence:
>207_bases ATGAGCGACGTGCCGGTGGTGGTCGGCACGGTCGCGTCGCCGTGCACCGACGTCTGCAGGATCGACCCGCGCACCGACTG GTGCGCGGGGTGCCTGCGCACGCGCGACGAGATCAAGGGATGGCGCGCGTCGGACGACGACGCGAGACGCGCACTGCTCG CGCGGCTCGACGCGCGGCGGCGCCTGCTCGCCCGGAGCGGCGCATAA
Upstream 100 bases:
>100_bases CGGCCGCCGGCCATCCGCACGCGGTGTTCAACCTGTCGCCGCAGGAGCTCGTCTCGTTGACCGGCGCACCGGTCGCCGAC GTCGCGTTGAGGAACGACGC
Downstream 100 bases:
>100_bases AAAAATGCCGTTCGGCCTGTCTGGCGAACGGCATGAGATCGGAATCCGGTGAACGTGATCAACGTCACAGCCGCATCATA CGAGCGACGCTGCGGCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MSDVPVVVGTVASPCTDVCRIDPRTDWCAGCLRTRDEIKGWRASDDDARRALLARLDARRRLLARSGA
Sequences:
>Translated_68_residues MSDVPVVVGTVASPCTDVCRIDPRTDWCAGCLRTRDEIKGWRASDDDARRALLARLDARRRLLARSGA >Mature_67_residues SDVPVVVGTVASPCTDVCRIDPRTDWCAGCLRTRDEIKGWRASDDDARRALLARLDARRRLLARSGA
Specific function: Unknown
COG id: COG3313
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7514; Mature: 7382
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVPVVVGTVASPCTDVCRIDPRTDWCAGCLRTRDEIKGWRASDDDARRALLARLDARR CCCCCEEECCCCCCHHHHHCCCCCCHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHH RLLARSGA HHHHHCCC >Mature Secondary Structure SDVPVVVGTVASPCTDVCRIDPRTDWCAGCLRTRDEIKGWRASDDDARRALLARLDARR CCCCEEECCCCCCHHHHHCCCCCCHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHH RLLARSGA HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA