Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is bglA [H]

Identifier: 115353038

GI number: 115353038

Start: 3297781

End: 3299199

Strand: Direct

Name: bglA [H]

Synonym: Bamb_2987

Alternate gene names: 115353038

Gene position: 3297781-3299199 (Clockwise)

Preceding gene: 115353037

Following gene: 115353041

Centisome position: 92.72

GC content: 69.42

Gene sequence:

>1419_bases
ATGATCAAACCCATCTCGCTTCAGAGCCGCCGACGATTTCTGGCGCAAGGCACCGCCATGCTCGGCAGCGGCATGCTGTC
CGCCTGCGGCGGCGATTCGATCGACTCCGACGCCTCCGCCCGCTTCGCCGACGACTTCGTGTGGGGCGTCGCCACCGCCG
CGCCGCAAATCGAAAGCCGCGACGGCCGCGGGCGCAGCAACTGGGACGTGTTCGCCGACCAGCCCGGCACGATCGCCGAC
GGCTCGACGAATGCGCGCTGCATCGAATTCGAGAAACGCTACCCGGGCGACCTCTCGCTGCTCGCGAACGCGGGCGTCCA
GGGATTCCGGTTCTCGACCGCGTGGCCGCGCGTGCAGCCGGACGGCCCCGGCGCGGCGAGCGAAGCGGGCCTCGCCACCT
ACGATCGCATGGTCGACGCGATGCTCGAGCGGCACCTCACGCCCTACCTGACGCTGTTTCACTGGGACATTCCGGTGTGG
GCCGGAGATTTTCGTGACCGCGACATTGCGTACCGGCTGGCCGACTACGCGCAGCAGGTGTCGCGCCGGCTCGGCGACCG
GGTCAAGCACTGGATGATGCTGAACGAGCCCAACGGCGTCGCGCTGTCCGGCTACGCGTACGGCGCGTCGCCGCCGCGCG
CGCAGTCCATGGGGGCGATGTTCGCCGCGATCCACCATCAGAACCTCGCGCAGGGGCTGATGTTCCAGGCCGTGCGTTCG
AACGTGCGCGGCGCGGCGCAGGTCGGCACCACGATCAGCGGGCGGCCGGTGCATGCGGCCACGAATGCGGCCGCCGATCA
GGCGGCCGCCGCGCAGTTCGACGCGATCTGGCATCGCGCGTTTCTCGACCCGCTGTACGGCAAGGGCTATCCGGCCGAGC
TGCAGGCGGCGCTGGCGCCGCTCGTGCAGCCGGGCGACATGGCGACGATCGCGGCGAACCCGGATTTCCTCGGCGTGCAG
TATTACAACTGCTTCTACGTGAAGGCCGGCGCCAACGGCACCGGCTTCGCGCTGGCCGCCAGCCCGGCGAACGAAACCCA
GACGCTGGGATATCCGGTCGAGCCGTACGGGATGTCCGAGATGCTGCTGCGCGTCCATCGCGACTACGGCGCGCCGCGCA
TCGTCGTCACCGAGACCGGGTTCGCGATCGCCGAGCCCGCGCCGAGCGGCGGCATCGTCGACGACGGCCCGCGTATCGAC
TACCTCGCGAGCTACCTGAACGCCGCGCACAACGCGTATCGGCAGGGCGTGCGCCTCGGCGGGGTGTTCTACTGGGCCGG
AATGGATAGCTGGGAGTGGTCCAGCGGCTTCGCGAAGAAATTCGGGCTGATCCACGTCGACCCGGCAACGCAGCAACGCG
TGCCGAAACGCAGCCTCGCGTACTACTCGCGCTGCATCGCCGGCAATCGCGTCGCGTAG

Upstream 100 bases:

>100_bases
GCATTGATCCGGCGCGCGCGCATTTCGCTGCGCCCCATGCCTCTTTAATCGCAATCCTAATCAAAACGCGGATGCCATTC
GCCGCACAACGAGTAAGCCC

Downstream 100 bases:

>100_bases
GCGGCGTAGGGCGCGCGGGCCGGCAGGCGGGCGGCCTGCGAACCCACGCGCCCGCCTGCCCGCGGCGCCCCGCCCGCCGT
CGGGCGGGCGCGTCGTCCCC

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MIKPISLQSRRRFLAQGTAMLGSGMLSACGGDSIDSDASARFADDFVWGVATAAPQIESRDGRGRSNWDVFADQPGTIAD
GSTNARCIEFEKRYPGDLSLLANAGVQGFRFSTAWPRVQPDGPGAASEAGLATYDRMVDAMLERHLTPYLTLFHWDIPVW
AGDFRDRDIAYRLADYAQQVSRRLGDRVKHWMMLNEPNGVALSGYAYGASPPRAQSMGAMFAAIHHQNLAQGLMFQAVRS
NVRGAAQVGTTISGRPVHAATNAAADQAAAAQFDAIWHRAFLDPLYGKGYPAELQAALAPLVQPGDMATIAANPDFLGVQ
YYNCFYVKAGANGTGFALAASPANETQTLGYPVEPYGMSEMLLRVHRDYGAPRIVVTETGFAIAEPAPSGGIVDDGPRID
YLASYLNAAHNAYRQGVRLGGVFYWAGMDSWEWSSGFAKKFGLIHVDPATQQRVPKRSLAYYSRCIAGNRVA

Sequences:

>Translated_472_residues
MIKPISLQSRRRFLAQGTAMLGSGMLSACGGDSIDSDASARFADDFVWGVATAAPQIESRDGRGRSNWDVFADQPGTIAD
GSTNARCIEFEKRYPGDLSLLANAGVQGFRFSTAWPRVQPDGPGAASEAGLATYDRMVDAMLERHLTPYLTLFHWDIPVW
AGDFRDRDIAYRLADYAQQVSRRLGDRVKHWMMLNEPNGVALSGYAYGASPPRAQSMGAMFAAIHHQNLAQGLMFQAVRS
NVRGAAQVGTTISGRPVHAATNAAADQAAAAQFDAIWHRAFLDPLYGKGYPAELQAALAPLVQPGDMATIAANPDFLGVQ
YYNCFYVKAGANGTGFALAASPANETQTLGYPVEPYGMSEMLLRVHRDYGAPRIVVTETGFAIAEPAPSGGIVDDGPRID
YLASYLNAAHNAYRQGVRLGGVFYWAGMDSWEWSSGFAKKFGLIHVDPATQQRVPKRSLAYYSRCIAGNRVA
>Mature_472_residues
MIKPISLQSRRRFLAQGTAMLGSGMLSACGGDSIDSDASARFADDFVWGVATAAPQIESRDGRGRSNWDVFADQPGTIAD
GSTNARCIEFEKRYPGDLSLLANAGVQGFRFSTAWPRVQPDGPGAASEAGLATYDRMVDAMLERHLTPYLTLFHWDIPVW
AGDFRDRDIAYRLADYAQQVSRRLGDRVKHWMMLNEPNGVALSGYAYGASPPRAQSMGAMFAAIHHQNLAQGLMFQAVRS
NVRGAAQVGTTISGRPVHAATNAAADQAAAAQFDAIWHRAFLDPLYGKGYPAELQAALAPLVQPGDMATIAANPDFLGVQ
YYNCFYVKAGANGTGFALAASPANETQTLGYPVEPYGMSEMLLRVHRDYGAPRIVVTETGFAIAEPAPSGGIVDDGPRID
YLASYLNAAHNAYRQGVRLGGVFYWAGMDSWEWSSGFAKKFGLIHVDPATQQRVPKRSLAYYSRCIAGNRVA

Specific function: Unknown

COG id: COG2723

COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 1 family [H]

Homologues:

Organism=Homo sapiens, GI32481206, Length=472, Percent_Identity=29.6610169491525, Blast_Score=185, Evalue=7e-47,
Organism=Homo sapiens, GI13273313, Length=464, Percent_Identity=28.6637931034483, Blast_Score=169, Evalue=4e-42,
Organism=Homo sapiens, GI110681710, Length=471, Percent_Identity=28.2377919320594, Blast_Score=168, Evalue=1e-41,
Organism=Homo sapiens, GI28376633, Length=453, Percent_Identity=26.7108167770419, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI24497614, Length=469, Percent_Identity=26.0127931769723, Blast_Score=122, Evalue=8e-28,
Organism=Escherichia coli, GI2367174, Length=472, Percent_Identity=27.3305084745763, Blast_Score=154, Evalue=8e-39,
Organism=Escherichia coli, GI2367270, Length=457, Percent_Identity=27.1334792122538, Blast_Score=150, Evalue=2e-37,
Organism=Escherichia coli, GI1789070, Length=472, Percent_Identity=25.2118644067797, Blast_Score=120, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17552856, Length=464, Percent_Identity=26.9396551724138, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17539390, Length=465, Percent_Identity=27.741935483871, Blast_Score=152, Evalue=3e-37,
Organism=Drosophila melanogaster, GI21356577, Length=495, Percent_Identity=28.8888888888889, Blast_Score=187, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001360
- InterPro:   IPR018120
- InterPro:   IPR017736
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00232 Glyco_hydro_1 [H]

EC number: =3.2.1.21 [H]

Molecular weight: Translated: 51067; Mature: 51067

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKPISLQSRRRFLAQGTAMLGSGMLSACGGDSIDSDASARFADDFVWGVATAAPQIESR
CCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
DGRGRSNWDVFADQPGTIADGSTNARCIEFEKRYPGDLSLLANAGVQGFRFSTAWPRVQP
CCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCEEECCCCCCCCC
DGPGAASEAGLATYDRMVDAMLERHLTPYLTLFHWDIPVWAGDFRDRDIAYRLADYAQQV
CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCHHHHHHHHHHHHH
SRRLGDRVKHWMMLNEPNGVALSGYAYGASPPRAQSMGAMFAAIHHQNLAQGLMFQAVRS
HHHHHHHHHHEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVRGAAQVGTTISGRPVHAATNAAADQAAAAQFDAIWHRAFLDPLYGKGYPAELQAALAP
CCCCHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LVQPGDMATIAANPDFLGVQYYNCFYVKAGANGTGFALAASPANETQTLGYPVEPYGMSE
CCCCCCEEEEECCCCEEEEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHH
MLLRVHRDYGAPRIVVTETGFAIAEPAPSGGIVDDGPRIDYLASYLNAAHNAYRQGVRLG
HHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEC
GVFYWAGMDSWEWSSGFAKKFGLIHVDPATQQRVPKRSLAYYSRCIAGNRVA
EEEEECCCCCCCCCCCHHHHCCEEEECCCHHHHCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIKPISLQSRRRFLAQGTAMLGSGMLSACGGDSIDSDASARFADDFVWGVATAAPQIESR
CCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
DGRGRSNWDVFADQPGTIADGSTNARCIEFEKRYPGDLSLLANAGVQGFRFSTAWPRVQP
CCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCEEECCCCCCCCC
DGPGAASEAGLATYDRMVDAMLERHLTPYLTLFHWDIPVWAGDFRDRDIAYRLADYAQQV
CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCHHHHHHHHHHHHH
SRRLGDRVKHWMMLNEPNGVALSGYAYGASPPRAQSMGAMFAAIHHQNLAQGLMFQAVRS
HHHHHHHHHHEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVRGAAQVGTTISGRPVHAATNAAADQAAAAQFDAIWHRAFLDPLYGKGYPAELQAALAP
CCCCHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LVQPGDMATIAANPDFLGVQYYNCFYVKAGANGTGFALAASPANETQTLGYPVEPYGMSE
CCCCCCEEEEECCCCEEEEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHH
MLLRVHRDYGAPRIVVTETGFAIAEPAPSGGIVDDGPRIDYLASYLNAAHNAYRQGVRLG
HHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEC
GVFYWAGMDSWEWSSGFAKKFGLIHVDPATQQRVPKRSLAYYSRCIAGNRVA
EEEEECCCCCCCCCCCHHHHCCEEEECCCHHHHCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8277941 [H]