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The map label for this gene is ctpA [H]

Identifier: 115352964

GI number: 115352964

Start: 3210607

End: 3212148

Strand: Direct

Name: ctpA [H]

Synonym: Bamb_2913

Alternate gene names: 115352964

Gene position: 3210607-3212148 (Clockwise)

Preceding gene: 115352963

Following gene: 115352965

Centisome position: 90.27

GC content: 66.02

Gene sequence:

>1542_bases
ATGCGAATGAAATTGAAGAACATCGGCCTGATTGCCGCGGGCCTCGCCACGGGCGTGTTCGCCACGCTGCAGGTTTCGGC
GTCGGCCGAGCAGACCGCCACTGCGCCGCTTCCCCTCGACCAGCTCCGCCTGTTCGCGGAAGTGTTCGGCCAGATCAAGC
GCGAGTACGTCGAGCCGGTCGACGACAAGAAGCTGCTGACGGCGGCGATCAAGGGCATGGTGTCGAGCCTCGACCCGCAT
TCGTCGTTCCTCGACAAGACCGACTATGACGAGCTGCAGGAGCAGACCAAGGGTCGCTTCGCGGGTCTCGGCATCGAGAT
CTCGCAGGAAGACGGCCTCGTCAAGGTGATCTCGCCGATCGAGGACACCCCCGCGTTCCGCGCCGGCATCCGTCCGGGCG
ACCTGATCACGCGCATCAACGACAAGCCGGTGCGCGGCATGACGCTCGACAAGGCCGTCAAGCAGATGCGCGGCGAGCCG
GGCACCAAGGTCACGCTGACGATCTTCCGCAAGAGCGACGACCGCACGTTCCCGATTACGGTCACGCGCGCGGTCATCCG
CGTGCAGAGCGTGAAGATGAAGCTGCTCGACCCGGGCTACGCGTACATCCGGATCACGAGCTTCCAGGAGCGCACGACGC
CCGATCTCGCCGCGAAGCTGCAGGACATCGCGCGCCAGCAGCCGAACCTGAAGGGCCTGATCGTCGACCTGCGCAACAAC
GGCGGCGGCCTGCTGCAGAGCGCGGTCGGCGTCGCCGGCGCGTTCCTGCCGCCCGACTCCGTCGTCGTGTCGACCAACGG
TCAGATCCCGGATTCGAAGCAGGTCTACCGCGACACCTACGACAACTACCGCCTGCCGTCCTTCGACGGCGATCCGCTGA
AGAACCTGCCGCCGGTCTTCAAGACCGTGCCGATGATCGTGCTGACGAACGCGTATTCGGCGTCCGCGTCGGAAATCGTC
GCCGGCGCGCTGCAGGATGCGAAGCGCGCGCAGATCATGGGCAAGACGACGTTCGGCAAGGGCTCGGTGCAGACGGTTCG
TCCGATGACGGCCGACACCGCGCTGCGCCTGACGACCGCCTACTACTACACGCCGAGCGGCCGTTCGATCCAGAACAAGG
GCATCACGCCCGACGTGCCGGTCGATCAGTACGCGGACGGCGATCCGGACGACGTGCTCGTGACGCGCGAGGTCGACTAT
ACGAACCACCTCGCGAACACGCAGGATCCGAACGAGAAGAAGGAACAGGAAGAGCGCGAGCAGCGCCGGATGGATCAGCT
GCGCGTCCTCGAAGAGCAGAACGACAAGAAGACGCCGGAGCAGCGCCAGAAGGACCGCGATCGCAAGCCGATCGAGTTCG
GCAGCGCCGACGACTTCATGATGCAGCAGGCGCTCAACAAGCTCGAAGGCAAGCCGGTGCAGGAATCGAAGTCGCGCCTC
GCCGAGAGCACGACGAAGAGCCCGGCCACCAAGGCCGCGACGCCCGCGAAGGCGTCGGGCGCGAAGGCCGCCGCACCGAA
GCCCGCGTCGGCACCGCAGTAA

Upstream 100 bases:

>100_bases
CCATTTCCGCAGCGTTCCACTGAGTATTCGGACGAACAGTTATACTTGTCCGCTACATCCCCGCTACCGCCACGCGCTTC
CCGACCGCACCAGACTCTCT

Downstream 100 bases:

>100_bases
GCGCCGGCCGGCATCCGACGGGCCATCGCGGGAAGACCGCGATGGCCCGTTTTTCATGCGCGCCTAAAATAACGCTACGT
CCGCCGCCTCGCTCACGACT

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MRMKLKNIGLIAAGLATGVFATLQVSASAEQTATAPLPLDQLRLFAEVFGQIKREYVEPVDDKKLLTAAIKGMVSSLDPH
SSFLDKTDYDELQEQTKGRFAGLGIEISQEDGLVKVISPIEDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEP
GTKVTLTIFRKSDDRTFPITVTRAVIRVQSVKMKLLDPGYAYIRITSFQERTTPDLAAKLQDIARQQPNLKGLIVDLRNN
GGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQVYRDTYDNYRLPSFDGDPLKNLPPVFKTVPMIVLTNAYSASASEIV
AGALQDAKRAQIMGKTTFGKGSVQTVRPMTADTALRLTTAYYYTPSGRSIQNKGITPDVPVDQYADGDPDDVLVTREVDY
TNHLANTQDPNEKKEQEEREQRRMDQLRVLEEQNDKKTPEQRQKDRDRKPIEFGSADDFMMQQALNKLEGKPVQESKSRL
AESTTKSPATKAATPAKASGAKAAAPKPASAPQ

Sequences:

>Translated_513_residues
MRMKLKNIGLIAAGLATGVFATLQVSASAEQTATAPLPLDQLRLFAEVFGQIKREYVEPVDDKKLLTAAIKGMVSSLDPH
SSFLDKTDYDELQEQTKGRFAGLGIEISQEDGLVKVISPIEDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEP
GTKVTLTIFRKSDDRTFPITVTRAVIRVQSVKMKLLDPGYAYIRITSFQERTTPDLAAKLQDIARQQPNLKGLIVDLRNN
GGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQVYRDTYDNYRLPSFDGDPLKNLPPVFKTVPMIVLTNAYSASASEIV
AGALQDAKRAQIMGKTTFGKGSVQTVRPMTADTALRLTTAYYYTPSGRSIQNKGITPDVPVDQYADGDPDDVLVTREVDY
TNHLANTQDPNEKKEQEEREQRRMDQLRVLEEQNDKKTPEQRQKDRDRKPIEFGSADDFMMQQALNKLEGKPVQESKSRL
AESTTKSPATKAATPAKASGAKAAAPKPASAPQ
>Mature_513_residues
MRMKLKNIGLIAAGLATGVFATLQVSASAEQTATAPLPLDQLRLFAEVFGQIKREYVEPVDDKKLLTAAIKGMVSSLDPH
SSFLDKTDYDELQEQTKGRFAGLGIEISQEDGLVKVISPIEDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEP
GTKVTLTIFRKSDDRTFPITVTRAVIRVQSVKMKLLDPGYAYIRITSFQERTTPDLAAKLQDIARQQPNLKGLIVDLRNN
GGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQVYRDTYDNYRLPSFDGDPLKNLPPVFKTVPMIVLTNAYSASASEIV
AGALQDAKRAQIMGKTTFGKGSVQTVRPMTADTALRLTTAYYYTPSGRSIQNKGITPDVPVDQYADGDPDDVLVTREVDY
TNHLANTQDPNEKKEQEEREQRRMDQLRVLEEQNDKKTPEQRQKDRDRKPIEFGSADDFMMQQALNKLEGKPVQESKSRL
AESTTKSPATKAATPAKASGAKAAAPKPASAPQ

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=339, Percent_Identity=31.5634218289086, Blast_Score=135, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 56222; Mature: 56222

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMKLKNIGLIAAGLATGVFATLQVSASAEQTATAPLPLDQLRLFAEVFGQIKREYVEPV
CCEEECCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DDKKLLTAAIKGMVSSLDPHSSFLDKTDYDELQEQTKGRFAGLGIEISQEDGLVKVISPI
CCHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHCCCEEECCEEECCCCCEEEEECCC
EDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEPGTKVTLTIFRKSDDRTFPIT
CCCCHHHCCCCCCHHEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEE
VTRAVIRVQSVKMKLLDPGYAYIRITSFQERTTPDLAAKLQDIARQQPNLKGLIVDLRNN
HHHHHHHHHHHHHEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECC
GGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQVYRDTYDNYRLPSFDGDPLKNLPPVF
CCHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
KTVPMIVLTNAYSASASEIVAGALQDAKRAQIMGKTTFGKGSVQTVRPMTADTALRLTTA
HHCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCEEEEEEE
YYYTPSGRSIQNKGITPDVPVDQYADGDPDDVLVTREVDYTNHLANTQDPNEKKEQEERE
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCCHHHHHHHHH
QRRMDQLRVLEEQNDKKTPEQRQKDRDRKPIEFGSADDFMMQQALNKLEGKPVQESKSRL
HHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
AESTTKSPATKAATPAKASGAKAAAPKPASAPQ
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRMKLKNIGLIAAGLATGVFATLQVSASAEQTATAPLPLDQLRLFAEVFGQIKREYVEPV
CCEEECCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DDKKLLTAAIKGMVSSLDPHSSFLDKTDYDELQEQTKGRFAGLGIEISQEDGLVKVISPI
CCHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHCCCEEECCEEECCCCCEEEEECCC
EDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEPGTKVTLTIFRKSDDRTFPIT
CCCCHHHCCCCCCHHEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEE
VTRAVIRVQSVKMKLLDPGYAYIRITSFQERTTPDLAAKLQDIARQQPNLKGLIVDLRNN
HHHHHHHHHHHHHEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECC
GGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQVYRDTYDNYRLPSFDGDPLKNLPPVF
CCHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
KTVPMIVLTNAYSASASEIVAGALQDAKRAQIMGKTTFGKGSVQTVRPMTADTALRLTTA
HHCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCEEEEEEE
YYYTPSGRSIQNKGITPDVPVDQYADGDPDDVLVTREVDYTNHLANTQDPNEKKEQEERE
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCCHHHHHHHHH
QRRMDQLRVLEEQNDKKTPEQRQKDRDRKPIEFGSADDFMMQQALNKLEGKPVQESKSRL
HHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
AESTTKSPATKAATPAKASGAKAAAPKPASAPQ
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]