Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352930

Identifier: 115352930

GI number: 115352930

Start: 3172963

End: 3173085

Strand: Direct

Name: 115352930

Synonym: Bamb_2879

Alternate gene names: NA

Gene position: 3172963-3173085 (Clockwise)

Preceding gene: 115352929

Following gene: 115352931

Centisome position: 89.21

GC content: 64.23

Gene sequence:

>123_bases
ATGTGGTATTTCAGCTGGATTCTCGGTATCGGCGTCGCGCTGTCGTTCGGCATCGTCAACGCGATGTGGCTCGAAGCGCG
GCAGAAGCCGCAGGAAGCGCCGGTGCGCGCACGCCGCGACTGA

Upstream 100 bases:

>100_bases
GTCACGCGCCAGACGCTCGAAGAGAACGAACACTCGATGTATTGAACCCGGCCGGGGGTGCGCACGCGCCCTCGCCCACC
GTTTCGCAAGGAGTCGGATC

Downstream 100 bases:

>100_bases
CGCGTGCGCGGCGGCGGCGACGCACCTCGCTGCGCCGCGCCGCCGTTGCGTCCGGAATGAACCTCGCTTCATGCGAGGTT
TTTTTTCGTCCGGGCAGCGA

Product: cyd operon protein YbgT

Products: NA

Alternate protein names: Cyd Operon Protein

Number of amino acids: Translated: 40; Mature: 40

Protein sequence:

>40_residues
MWYFSWILGIGVALSFGIVNAMWLEARQKPQEAPVRARRD

Sequences:

>Translated_40_residues
MWYFSWILGIGVALSFGIVNAMWLEARQKPQEAPVRARRD
>Mature_40_residues
MWYFSWILGIGVALSFGIVNAMWLEARQKPQEAPVRARRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4665; Mature: 4665

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWYFSWILGIGVALSFGIVNAMWLEARQKPQEAPVRARRD
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MWYFSWILGIGVALSFGIVNAMWLEARQKPQEAPVRARRD
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA