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The map label for this gene is ftsY [H]

Identifier: 115352920

GI number: 115352920

Start: 3162001

End: 3163161

Strand: Direct

Name: ftsY [H]

Synonym: Bamb_2869

Alternate gene names: 115352920

Gene position: 3162001-3163161 (Clockwise)

Preceding gene: 115352916

Following gene: 115352922

Centisome position: 88.91

GC content: 66.93

Gene sequence:

>1161_bases
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGTCCGACTCCACGGAATCGCAATCGGCCGACGCGCTGCAACC
GGACGAGCCGTCCGATGCGCCCGCCGCCGATGCCCGTCAGGCGATCGAAGCCCCGCCAGCCCCCGCGCAACCGCAACCGG
CCGCGCCGGCCGTCGTGATGACGGTCACGCCGACCAACGACGGCAGCGACGACGTCGTCGAAGCGGTCGAGATCGTGCCG
CCGCCGACGCAGGACGCCTCCGCGAAGAAATCGTGGCTCACCCGCCTGAAAACGGGGCTCGCGAAGACGGGTTCGAGCAT
CACCGGCGTGTTCGTCAACACGAAGATCGACGAGGATCTGTACGAAGAACTCGAAGCCGCGCTGCTGATGTCCGACGCCG
GCGTCGATGCGACCGAGTACCTGCTCGGTGCGCTGCGCGAGAAAGTGAAAACGGGCCGGCTGACCGATCCGCAGCAGGTG
AAGAGCGCGCTGCACGATCTGCTCGTCGAACTGCTGAAGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCAGCCGCT
CGTGATGATGATCACGGGCGTGAACGGCGCGGGCAAGACCACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCG
ACCAATCGGTGCTGCTGGCCGCGGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCGGTCTGGGGCGAGCGCAAC
AACGTGACGGTCGTCCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGCGCGCAA
GATCGACGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGAAGC
GCGTGATCTCGAAGGCGCACGACGGCGCGCCGCACGAGGTGCTGCTCGTGATCGACGCGAACACCGGCCAGAACGCGCTC
ACGCAGGTGAAGGCCTTCGACGATGCGCTCGGCCTCACGGGCCTGATCGTCACGAAGCTCGACGGCACCGCCAAGGGCGG
GATTCTGGCGGCGATCGCGCGGCAGCGCCCGGTGCCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGGACCTGCAGC
CGTTCAACGCCGTGGAATTCGCGGACGCGCTATTCGACTGA

Upstream 100 bases:

>100_bases
CGCACTGATAAAATGCACTGTTTCGGCCGCCGTGCGCACGCCCGACAGCCCCTGCCGCGCGCCAGCCCGCGGCGCCCCGC
CCTCTTCCCGACGTCAGACC

Downstream 100 bases:

>100_bases
ACGCCGCCGGCCCGCATCGCACGGGGCGCCTTCGGGCGCCCTTTTTCATGCGCGCCGGCCACCGCCAGCCGGGGCCGCGG
CCGGGGCATCGCCCGGTGTC

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MFSFFKRFKKTQESDSTESQSADALQPDEPSDAPAADARQAIEAPPAPAQPQPAAPAVVMTVTPTNDGSDDVVEAVEIVP
PPTQDASAKKSWLTRLKTGLAKTGSSITGVFVNTKIDEDLYEELEAALLMSDAGVDATEYLLGALREKVKTGRLTDPQQV
KSALHDLLVELLKPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERN
NVTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAHDGAPHEVLLVIDANTGQNAL
TQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFNAVEFADALFD

Sequences:

>Translated_386_residues
MFSFFKRFKKTQESDSTESQSADALQPDEPSDAPAADARQAIEAPPAPAQPQPAAPAVVMTVTPTNDGSDDVVEAVEIVP
PPTQDASAKKSWLTRLKTGLAKTGSSITGVFVNTKIDEDLYEELEAALLMSDAGVDATEYLLGALREKVKTGRLTDPQQV
KSALHDLLVELLKPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERN
NVTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAHDGAPHEVLLVIDANTGQNAL
TQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFNAVEFADALFD
>Mature_386_residues
MFSFFKRFKKTQESDSTESQSADALQPDEPSDAPAADARQAIEAPPAPAQPQPAAPAVVMTVTPTNDGSDDVVEAVEIVP
PPTQDASAKKSWLTRLKTGLAKTGSSITGVFVNTKIDEDLYEELEAALLMSDAGVDATEYLLGALREKVKTGRLTDPQQV
KSALHDLLVELLKPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERN
NVTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAHDGAPHEVLLVIDANTGQNAL
TQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFNAVEFADALFD

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=284, Percent_Identity=30.9859154929577, Blast_Score=125, Evalue=7e-29,
Organism=Homo sapiens, GI226371618, Length=234, Percent_Identity=32.4786324786325, Blast_Score=119, Evalue=6e-27,
Organism=Homo sapiens, GI295424842, Length=301, Percent_Identity=31.5614617940199, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI23308697, Length=293, Percent_Identity=31.740614334471, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI89061728, Length=136, Percent_Identity=35.2941176470588, Blast_Score=84, Evalue=2e-16,
Organism=Escherichia coli, GI1789874, Length=307, Percent_Identity=50.814332247557, Blast_Score=292, Evalue=2e-80,
Organism=Escherichia coli, GI1788963, Length=284, Percent_Identity=34.8591549295775, Blast_Score=144, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI193206261, Length=300, Percent_Identity=30.3333333333333, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17539958, Length=297, Percent_Identity=26.5993265993266, Blast_Score=106, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6325345, Length=302, Percent_Identity=28.476821192053, Blast_Score=117, Evalue=4e-27,
Organism=Saccharomyces cerevisiae, GI6320498, Length=240, Percent_Identity=30.4166666666667, Blast_Score=93, Evalue=6e-20,
Organism=Drosophila melanogaster, GI17647949, Length=284, Percent_Identity=32.0422535211268, Blast_Score=131, Evalue=7e-31,
Organism=Drosophila melanogaster, GI24641198, Length=260, Percent_Identity=31.1538461538462, Blast_Score=100, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 41171; Mature: 41171

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSFFKRFKKTQESDSTESQSADALQPDEPSDAPAADARQAIEAPPAPAQPQPAAPAVVM
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEE
TVTPTNDGSDDVVEAVEIVPPPTQDASAKKSWLTRLKTGLAKTGSSITGVFVNTKIDEDL
EEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHH
YEELEAALLMSDAGVDATEYLLGALREKVKTGRLTDPQQVKSALHDLLVELLKPLEKSLM
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERN
HCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCC
NVTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAH
CEEEEEECCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHC
DGAPHEVLLVIDANTGQNALTQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPV
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCE
YFIGVGEKVEDLQPFNAVEFADALFD
EEEECCCCHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MFSFFKRFKKTQESDSTESQSADALQPDEPSDAPAADARQAIEAPPAPAQPQPAAPAVVM
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEE
TVTPTNDGSDDVVEAVEIVPPPTQDASAKKSWLTRLKTGLAKTGSSITGVFVNTKIDEDL
EEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHH
YEELEAALLMSDAGVDATEYLLGALREKVKTGRLTDPQQVKSALHDLLVELLKPLEKSLM
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERN
HCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCC
NVTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAH
CEEEEEECCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHC
DGAPHEVLLVIDANTGQNALTQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPV
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCE
YFIGVGEKVEDLQPFNAVEFADALFD
EEEECCCCHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]