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The map label for this gene is glyQ

Identifier: 115352804

GI number: 115352804

Start: 3033078

End: 3034082

Strand: Direct

Name: glyQ

Synonym: Bamb_2753

Alternate gene names: 115352804

Gene position: 3033078-3034082 (Clockwise)

Preceding gene: 115352802

Following gene: 115352805

Centisome position: 85.28

GC content: 65.67

Gene sequence:

>1005_bases
ATGCTTACGTTTCAGCAAATCATCCTGACGCTGCAGTCCTACTGGGACAAGCAGGGTTGCGCCCTGCTCCAGCCCATCGA
CATGGAAGTCGGCGCGGGCACGTCGCACGTCCACACGTTCCTGCGCGCGGTCGGCCCCGAGCCGTGGCGCGCCGCGTACG
TGCAGCCGTCGCGCCGCCCGAAGGACGGCCGCTACGGCGAGAACCCGAACCGCCTGCAGCATTACTACCAGTACCAGGTC
GTGCTCAAGCCGGCGCCGGAAAACATCCTCGACCTGTACCTCGGCTCGCTGGAAGCGCTCGGCTTCGACCTGAAGCAGAA
CGACGTGCGCTTCGTCGAGGACGACTGGGAGAACCCGACGCTCGGCGCGTGGGGCCTCGGCTGGGAAGTGTGGCTGAACG
GGATGGAAGTCACGCAGTTCACGTATTTCCAGGAAGTCGGCGGCCTCGAATGCAAACCGGTGCTCGGCGAAATCACGTAC
GGCCTCGAGCGCCTCGCGATGTACCTGCAGAAGGTCGAGAACGTGTACGACCTGGTCTGGACCGAGTGGGAAGAGCAAGG
CCCGAACGGCCCCGAGCTGCGCCGCCTGTCGTACGGCGACGTCTACCACCAGAACGAGGTCGAGCAGTCGACCTACAACT
TCGAGCACGCGAACGTCGACCTGCTGTTCACGTTCTTCAACAGCTACGAAGCGGAAGCGAAGAAGATGATCGACGCGCAG
CTCGCGCTGCCCGCGTACGAACTCGTGCTGAAGGCCGGCCACACGTTCAACCTGCTCGATGCGCGCGGCGCGATCTCGGT
CACCGAACGCGCGGCCTACATCGGCCGCATCCGCGCGCTGTCGCGTCTCGTCGCGCAGGCTTACTACGACTCGCGCGAGA
AGCTCGGCTTCCCGATGCTCGGCAACCCGCCGGGCGTGCCGGGCCTCACCACCGACGCCCAGGACGCCGCGCAGCCGGCA
TGGGCGCCGCCGCTCAAGGTCGAACGCAAGATCGATCAGGACTGA

Upstream 100 bases:

>100_bases
TTTCAGCACACTAACAAGCCGCGCCGCCGCGCGAGCCGACCCTCCGGGCTCCGCCCGGAGCGCCGTTCGCAACGGAGCGC
CAGCGCCACGAAGGCTCTTC

Downstream 100 bases:

>100_bases
CGAGACGAGATTGATTCCACACATGACGCATAACCATCCCGCCCCCCTGCTCGTCGAATTGCTGACCGAAGAGCTGCCGC
CGAAGGCCCTCGCGCGCCTC

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MLTFQQIILTLQSYWDKQGCALLQPIDMEVGAGTSHVHTFLRAVGPEPWRAAYVQPSRRPKDGRYGENPNRLQHYYQYQV
VLKPAPENILDLYLGSLEALGFDLKQNDVRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQEVGGLECKPVLGEITY
GLERLAMYLQKVENVYDLVWTEWEEQGPNGPELRRLSYGDVYHQNEVEQSTYNFEHANVDLLFTFFNSYEAEAKKMIDAQ
LALPAYELVLKAGHTFNLLDARGAISVTERAAYIGRIRALSRLVAQAYYDSREKLGFPMLGNPPGVPGLTTDAQDAAQPA
WAPPLKVERKIDQD

Sequences:

>Translated_334_residues
MLTFQQIILTLQSYWDKQGCALLQPIDMEVGAGTSHVHTFLRAVGPEPWRAAYVQPSRRPKDGRYGENPNRLQHYYQYQV
VLKPAPENILDLYLGSLEALGFDLKQNDVRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQEVGGLECKPVLGEITY
GLERLAMYLQKVENVYDLVWTEWEEQGPNGPELRRLSYGDVYHQNEVEQSTYNFEHANVDLLFTFFNSYEAEAKKMIDAQ
LALPAYELVLKAGHTFNLLDARGAISVTERAAYIGRIRALSRLVAQAYYDSREKLGFPMLGNPPGVPGLTTDAQDAAQPA
WAPPLKVERKIDQD
>Mature_334_residues
MLTFQQIILTLQSYWDKQGCALLQPIDMEVGAGTSHVHTFLRAVGPEPWRAAYVQPSRRPKDGRYGENPNRLQHYYQYQV
VLKPAPENILDLYLGSLEALGFDLKQNDVRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQEVGGLECKPVLGEITY
GLERLAMYLQKVENVYDLVWTEWEEQGPNGPELRRLSYGDVYHQNEVEQSTYNFEHANVDLLFTFFNSYEAEAKKMIDAQ
LALPAYELVLKAGHTFNLLDARGAISVTERAAYIGRIRALSRLVAQAYYDSREKLGFPMLGNPPGVPGLTTDAQDAAQPA
WAPPLKVERKIDQD

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=302, Percent_Identity=70.8609271523179, Blast_Score=442, Evalue=1e-125,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 38044; Mature: 38044

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTFQQIILTLQSYWDKQGCALLQPIDMEVGAGTSHVHTFLRAVGPEPWRAAYVQPSRRP
CCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCC
KDGRYGENPNRLQHYYQYQVVLKPAPENILDLYLGSLEALGFDLKQNDVRFVEDDWENPT
CCCCCCCCHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCC
LGAWGLGWEVWLNGMEVTQFTYFQEVGGLECKPVLGEITYGLERLAMYLQKVENVYDLVW
CCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEWEEQGPNGPELRRLSYGDVYHQNEVEQSTYNFEHANVDLLFTFFNSYEAEAKKMIDAQ
HHHHHCCCCCCHHEEECCCCCCCCCHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHH
LALPAYELVLKAGHTFNLLDARGAISVTERAAYIGRIRALSRLVAQAYYDSREKLGFPML
HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GNPPGVPGLTTDAQDAAQPAWAPPLKVERKIDQD
CCCCCCCCCCCCCHHHCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure
MLTFQQIILTLQSYWDKQGCALLQPIDMEVGAGTSHVHTFLRAVGPEPWRAAYVQPSRRP
CCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCC
KDGRYGENPNRLQHYYQYQVVLKPAPENILDLYLGSLEALGFDLKQNDVRFVEDDWENPT
CCCCCCCCHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCC
LGAWGLGWEVWLNGMEVTQFTYFQEVGGLECKPVLGEITYGLERLAMYLQKVENVYDLVW
CCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEWEEQGPNGPELRRLSYGDVYHQNEVEQSTYNFEHANVDLLFTFFNSYEAEAKKMIDAQ
HHHHHCCCCCCHHEEECCCCCCCCCHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHH
LALPAYELVLKAGHTFNLLDARGAISVTERAAYIGRIRALSRLVAQAYYDSREKLGFPML
HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GNPPGVPGLTTDAQDAAQPAWAPPLKVERKIDQD
CCCCCCCCCCCCCHHHCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]