Click here to switch to the map view.

The map label for this gene is cc4 [H]

Identifier: 115352772

GI number: 115352772

Start: 2997999

End: 2998688

Strand: Direct

Name: cc4 [H]

Synonym: Bamb_2721

Alternate gene names: 115352772

Gene position: 2997999-2998688 (Clockwise)

Preceding gene: 115352770

Following gene: 115352773

Centisome position: 84.3

GC content: 68.99

Gene sequence:

>690_bases
ATGAGCGCTGCTCAAGCGCAGACCAAGCCCACGGAGCAAGCGCACGCCCAGCAGGCGCCGCTCAAGGCACCCGATACGAT
GGCCGAGCGTGTGCGCGGCTGTACCGCATGCCACGGCGTTCACGGCCAGGGCACCGATAACGACTACTTCCCGCGTCTTG
CCGGCAAGCCGGCCGAGTACCTGTACAACCAGCTCGTCAACTTCCGTGACGGACGGCGCAAGTACCCGCCGATGAACTAC
CTGCTGACGTACCTGAACGACGATTACCTGAAAGAGATCGCCGAGCACTTCTCGGCCGAGCGTCCGCCGTACCCGACGCC
CGCCAAGCCGACGCTGCCGGCCGCCACGCTCGCGCGCGGCAAGCAGCTCGTCACGCAAGGCGATCCGTCGCGCAAGCTGC
CGGCCTGCGTGGCCTGCCACGGCGCCGGGCTGACCGGCATGCAGCCGGCGATCCCGGGCCTCGTCGGCCTGCACGCCGAT
TACCTGAGCGCACAGCTCGGCGCATGGCGCTCGGGCAACCGCCACGCGAAGGCACCGGATTGCATGCACGACATCGCGTC
GAAGCTGTCGGATGAAGACGTCACGGCCGTGACCGCGTGGCTCGCCGCGCAACCGGCGCCCGCCAACCCCGTGCCGGCCC
CGGCGCGTTCGATGAAGACTCCGCTCGCCTGCGGCAGCGAACCGCAATAA

Upstream 100 bases:

>100_bases
CCGGACAGGTCCCCGACGAATAAACATGGAGTCTCGTGTGTCTTCAAGACGCCTCTTCCGTCCGTTGCTCGCCGTTCTCT
TGATCGGTGGCGCGGGCCTT

Downstream 100 bases:

>100_bases
GGCAAGGGAGACAGACACAATGAAACGCAAGTCCCTGTTTGCACTCTCGGCTGTCGCGATCGTCGCGGCAGTCGCCCTCG
TGCCGGTCCTGTGGCCGGGC

Product: class I cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSAAQAQTKPTEQAHAQQAPLKAPDTMAERVRGCTACHGVHGQGTDNDYFPRLAGKPAEYLYNQLVNFRDGRRKYPPMNY
LLTYLNDDYLKEIAEHFSAERPPYPTPAKPTLPAATLARGKQLVTQGDPSRKLPACVACHGAGLTGMQPAIPGLVGLHAD
YLSAQLGAWRSGNRHAKAPDCMHDIASKLSDEDVTAVTAWLAAQPAPANPVPAPARSMKTPLACGSEPQ

Sequences:

>Translated_229_residues
MSAAQAQTKPTEQAHAQQAPLKAPDTMAERVRGCTACHGVHGQGTDNDYFPRLAGKPAEYLYNQLVNFRDGRRKYPPMNY
LLTYLNDDYLKEIAEHFSAERPPYPTPAKPTLPAATLARGKQLVTQGDPSRKLPACVACHGAGLTGMQPAIPGLVGLHAD
YLSAQLGAWRSGNRHAKAPDCMHDIASKLSDEDVTAVTAWLAAQPAPANPVPAPARSMKTPLACGSEPQ
>Mature_228_residues
SAAQAQTKPTEQAHAQQAPLKAPDTMAERVRGCTACHGVHGQGTDNDYFPRLAGKPAEYLYNQLVNFRDGRRKYPPMNYL
LTYLNDDYLKEIAEHFSAERPPYPTPAKPTLPAATLARGKQLVTQGDPSRKLPACVACHGAGLTGMQPAIPGLVGLHADY
LSAQLGAWRSGNRHAKAPDCMHDIASKLSDEDVTAVTAWLAAQPAPANPVPAPARSMKTPLACGSEPQ

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 24560; Mature: 24429

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS51007 CYTC L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAQAQTKPTEQAHAQQAPLKAPDTMAERVRGCTACHGVHGQGTDNDYFPRLAGKPAEY
CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
LYNQLVNFRDGRRKYPPMNYLLTYLNDDYLKEIAEHFSAERPPYPTPAKPTLPAATLARG
HHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
KQLVTQGDPSRKLPACVACHGAGLTGMQPAIPGLVGLHADYLSAQLGAWRSGNRHAKAPD
HHHHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
CMHDIASKLSDEDVTAVTAWLAAQPAPANPVPAPARSMKTPLACGSEPQ
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SAAQAQTKPTEQAHAQQAPLKAPDTMAERVRGCTACHGVHGQGTDNDYFPRLAGKPAEY
CCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
LYNQLVNFRDGRRKYPPMNYLLTYLNDDYLKEIAEHFSAERPPYPTPAKPTLPAATLARG
HHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
KQLVTQGDPSRKLPACVACHGAGLTGMQPAIPGLVGLHADYLSAQLGAWRSGNRHAKAPD
HHHHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
CMHDIASKLSDEDVTAVTAWLAAQPAPANPVPAPARSMKTPLACGSEPQ
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]