Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352768

Identifier: 115352768

GI number: 115352768

Start: 2994188

End: 2994436

Strand: Direct

Name: 115352768

Synonym: Bamb_2717

Alternate gene names: NA

Gene position: 2994188-2994436 (Clockwise)

Preceding gene: 115352766

Following gene: 115352770

Centisome position: 84.19

GC content: 70.28

Gene sequence:

>249_bases
ATGCTCGAACTGCGCCCCGGCTGCGAATGCTGCAACAAGGACCTGCCGCCCGATTCGGCGGAAGCCCGCATCTGTACGTT
TGACTGCACGTTCTGCGCGACCTGCACCGACGAGGTGCTGAAGGGCCGCTGCCCGAACTGCGGCGGCGACCTGGTCGCTC
GCCCGCGCCGGCCGGCGAGCCTGCTCGCGAAGTATCCGGCGTCGACGGAGCGCATCCACAAGCCGGGCGGCTGCGCGAAC
GCCGCCTGA

Upstream 100 bases:

>100_bases
TTGGCCGGGCCGATCCATGCAGGTACAGTAGCGCGCACATGCGCCGCACGCAATGTCCGGCGGCGCCCGTCCCGACCCGT
CCCAACCAAGGAAAACCGTC

Downstream 100 bases:

>100_bases
CGGCGCCGCATCGCGCGCCGCTTCCCGTTACGACATCTCGATGCGCGCGCGCGTGATCGCGAGCAGCGACGCCATCGCGC
GGCGCGCGCCGTCCTCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MLELRPGCECCNKDLPPDSAEARICTFDCTFCATCTDEVLKGRCPNCGGDLVARPRRPASLLAKYPASTERIHKPGGCAN
AA

Sequences:

>Translated_82_residues
MLELRPGCECCNKDLPPDSAEARICTFDCTFCATCTDEVLKGRCPNCGGDLVARPRRPASLLAKYPASTERIHKPGGCAN
AA
>Mature_82_residues
MLELRPGCECCNKDLPPDSAEARICTFDCTFCATCTDEVLKGRCPNCGGDLVARPRRPASLLAKYPASTERIHKPGGCAN
AA

Specific function: Unknown

COG id: COG3813

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010696
- InterPro:   IPR013083 [H]

Pfam domain/function: PF06906 DUF1272 [H]

EC number: NA

Molecular weight: Translated: 8758; Mature: 8758

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

12.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
13.4 %Cys+Met (Translated Protein)
12.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
13.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELRPGCECCNKDLPPDSAEARICTFDCTFCATCTDEVLKGRCPNCGGDLVARPRRPAS
CCCCCCCHHHCCCCCCCCCCCCEEEEECCCEECCCHHHHHCCCCCCCCCCCCCCCCCCHH
LLAKYPASTERIHKPGGCANAA
HHHHCCCCCCCEECCCCCCCCC
>Mature Secondary Structure
MLELRPGCECCNKDLPPDSAEARICTFDCTFCATCTDEVLKGRCPNCGGDLVARPRRPAS
CCCCCCCHHHCCCCCCCCCCCCEEEEECCCEECCCHHHHHCCCCCCCCCCCCCCCCCCHH
LLAKYPASTERIHKPGGCANAA
HHHHCCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8121412; 11481430 [H]