| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352732
Identifier: 115352732
GI number: 115352732
Start: 2952625
End: 2953071
Strand: Direct
Name: 115352732
Synonym: Bamb_2681
Alternate gene names: NA
Gene position: 2952625-2953071 (Clockwise)
Preceding gene: 115352731
Following gene: 115352733
Centisome position: 83.02
GC content: 65.1
Gene sequence:
>447_bases ATGCCACGTTTTGCCCGCCTGTTCGAAGCCGCTGCCGATACGCTGAACGCCTACTACCAGGCCGTCGCCGATGCCAATCT CGACGCGCTGCTGGGGTTGTGGATCGACGAGGACTTCGCCAGCTGCGTCTGGGCCGACGGCGAGCATCTGCACGGCCTCG ACCAGATCCGCAGCGGGCTGGCCAACCGGCTCGCGACGCGCCCGGTCACGATCGAACCGCTCGACATCCGTGTTTACGAC AGTCTCGGCACCGTCGTCTATACGATCGCCGAAGCGCATCAGCAGGCCGACCTGACGGCCGAACCCGACATGGTTTTCGC GACGTACGTGATGATCCACGAACGCGGCGAGTGGCGCATCGCGCATATCCACGCGAGCCCGATTCCTGAACAGGCGGCCG GACAATTCGCCGCGAAGATCCGTCACGGGCAGGGTCCGCTGCACTGA
Upstream 100 bases:
>100_bases TCGCACGACGCGCCGGGCAATCCGATTCACCGGTGCAAGGCGGCCCCACCCGGGCCGCCGTGCTGAATACGGCGCGCGAC GCGCGCGAGAGATAACCCCG
Downstream 100 bases:
>100_bases CGAACAACGAAGCAACGCATTAGCGGGGCGATCATGAGTACGGCTTCTCCGCCCACCTCGCCGCTGACCGGGGCCCCGGC CCCCGACGACGATTCATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MPRFARLFEAAADTLNAYYQAVADANLDALLGLWIDEDFASCVWADGEHLHGLDQIRSGLANRLATRPVTIEPLDIRVYD SLGTVVYTIAEAHQQADLTAEPDMVFATYVMIHERGEWRIAHIHASPIPEQAAGQFAAKIRHGQGPLH
Sequences:
>Translated_148_residues MPRFARLFEAAADTLNAYYQAVADANLDALLGLWIDEDFASCVWADGEHLHGLDQIRSGLANRLATRPVTIEPLDIRVYD SLGTVVYTIAEAHQQADLTAEPDMVFATYVMIHERGEWRIAHIHASPIPEQAAGQFAAKIRHGQGPLH >Mature_147_residues PRFARLFEAAADTLNAYYQAVADANLDALLGLWIDEDFASCVWADGEHLHGLDQIRSGLANRLATRPVTIEPLDIRVYDS LGTVVYTIAEAHQQADLTAEPDMVFATYVMIHERGEWRIAHIHASPIPEQAAGQFAAKIRHGQGPLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16388; Mature: 16256
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRFARLFEAAADTLNAYYQAVADANLDALLGLWIDEDFASCVWADGEHLHGLDQIRSGL CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHEECCCCCCCCHHHHHHHH ANRLATRPVTIEPLDIRVYDSLGTVVYTIAEAHQQADLTAEPDMVFATYVMIHERGEWRI HHHHHCCCCEECCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHEEEEEECCCEEE AHIHASPIPEQAAGQFAAKIRHGQGPLH EEEECCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PRFARLFEAAADTLNAYYQAVADANLDALLGLWIDEDFASCVWADGEHLHGLDQIRSGL CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHEECCCCCCCCHHHHHHHH ANRLATRPVTIEPLDIRVYDSLGTVVYTIAEAHQQADLTAEPDMVFATYVMIHERGEWRI HHHHHCCCCEECCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHEEEEEECCCEEE AHIHASPIPEQAAGQFAAKIRHGQGPLH EEEECCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA