The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352669

Identifier: 115352669

GI number: 115352669

Start: 2881767

End: 2883089

Strand: Direct

Name: 115352669

Synonym: Bamb_2618

Alternate gene names: NA

Gene position: 2881767-2883089 (Clockwise)

Preceding gene: 115352668

Following gene: 115352671

Centisome position: 81.03

GC content: 72.03

Gene sequence:

>1323_bases
ATGGGTGACGGCAGGACGCGGCGCAACACGCCGACGCAACGACAGCAGCGCGACGAAGCGGACGGGTCGCACGCCGACGG
GCAGTTCGACCTGTTCGGCGCGCCGCCCGACGACGCACGCGCGGCGGCTGCGCCCTTCGACGATGACCACCCAGCCGGTG
CCGGCGAACGCGTGACGCCTGGCAAGCACGATGCCGCGCAACTGGCAAAGTCGCCTGCGCGCGCGGGCCGTGCGTCGCCC
CGCCCTTCCTCCGATCAGGAACCGGAACCGCCCGCCGCCTCAGGGCTGCTGTGGGACGACCCGTTGCCGCCTGCCACGCC
GCCGAAGAAGAGCAGGCGCCAGCGCGGCGTGCCGCCCGCACCGGTTTCCGCGGAAGTCGCCGACGTGGCGGCCGCCCTGC
CGCCGAATGTGCGGCTCGGCACGTCGTCGTGGTATTTCCCCGGCTGGGACGGCATCGTCTACGACGGCGATTTCGCGCAG
ACGAAACTGTCGCGCGAGGGGCTCGAAGCGTACGGCGCGCATCCGCTGCTGAAGAGCGTAAGCCTCGACCGCTCGTTCTA
CGGCCCGCTGTCGGTGGCCGACTACCTGCGCTACGCACAACAGGTGCCGGACGACTTCCGCTTCGTCGTGAAGGCGCCGG
CGTCCGTCACCGACGCGGTCGTGCGCGGCCGGCGCGGCGAGCCGTCGGGCCCGAACCCGACCTTTCTCGACGCGCAGCTC
GCCATCCGGGAATTCGTGCAGCCGTGCATCGAAGGGCTCGGCAAGAAGGCCGGCGTGCTGGTGTTCCAGTTTTCGCCGAT
GCCCGATCAACTGCTCGTCGAACCGGCCGCGCTGATCGACCGGCTGTCGGCGTTCTTCGCGGCGCTGCCGCCGCTGCCGC
TAGACGCCGACGGCACGCGCTACGCGATCGAGATCCGCGACGCGTGCCTGCTCACGCCGCGCTTCATCCGCGCGCTCGCG
GCGCTGGGCGTGCGCTACTGCGTCGGCCTGCATGCGCGGATGCCCGACCCGCTGCGCCAGGCGGCCGCGCTCGCGCTGCT
CGACGGCGACGCGCCGGGCCCGCTGATCGTGCGGTGGAGCCTGCACGGCGGATTCAAGTACGAACAGGCGAAGGCGAAGT
ACGAGCCGTTCGACAAGCTCGTCGACGAAGATCCGGCCACGCGCTCGGCGCTCGCCGAGCTGGCCGCGCGCTACGCGCTG
GCCGGACAGCCGGTGATCATCACGATCAACAACAAGGCGGAAGGCTCCGCGCCGCTGTCGTGCGTCGCGCTCGCGCGCGA
GATCGCCGCCGCGTGCGCGCAGTGGCGCAGCGAGGCGGCGTAG

Upstream 100 bases:

>100_bases
GCCGCAAGGCCGGACGCAGCGCGAAAACGCTGCCGTGGTCGCGGCGCTATATGTACGAACACACGCTGCCGCGCTAGGCG
GCACTTCACGCTGGGCACGC

Downstream 100 bases:

>100_bases
GGTTCGGCGGCGGGCGTCTCGCGGCGCCGCCTAGCGCTTGCCGGCCGATTACGCGCCGCGCAGCGACTTCAGCCGGTGCG
AGAACTTCTGGCGGAATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MGDGRTRRNTPTQRQQRDEADGSHADGQFDLFGAPPDDARAAAAPFDDDHPAGAGERVTPGKHDAAQLAKSPARAGRASP
RPSSDQEPEPPAASGLLWDDPLPPATPPKKSRRQRGVPPAPVSAEVADVAAALPPNVRLGTSSWYFPGWDGIVYDGDFAQ
TKLSREGLEAYGAHPLLKSVSLDRSFYGPLSVADYLRYAQQVPDDFRFVVKAPASVTDAVVRGRRGEPSGPNPTFLDAQL
AIREFVQPCIEGLGKKAGVLVFQFSPMPDQLLVEPAALIDRLSAFFAALPPLPLDADGTRYAIEIRDACLLTPRFIRALA
ALGVRYCVGLHARMPDPLRQAAALALLDGDAPGPLIVRWSLHGGFKYEQAKAKYEPFDKLVDEDPATRSALAELAARYAL
AGQPVIITINNKAEGSAPLSCVALAREIAAACAQWRSEAA

Sequences:

>Translated_440_residues
MGDGRTRRNTPTQRQQRDEADGSHADGQFDLFGAPPDDARAAAAPFDDDHPAGAGERVTPGKHDAAQLAKSPARAGRASP
RPSSDQEPEPPAASGLLWDDPLPPATPPKKSRRQRGVPPAPVSAEVADVAAALPPNVRLGTSSWYFPGWDGIVYDGDFAQ
TKLSREGLEAYGAHPLLKSVSLDRSFYGPLSVADYLRYAQQVPDDFRFVVKAPASVTDAVVRGRRGEPSGPNPTFLDAQL
AIREFVQPCIEGLGKKAGVLVFQFSPMPDQLLVEPAALIDRLSAFFAALPPLPLDADGTRYAIEIRDACLLTPRFIRALA
ALGVRYCVGLHARMPDPLRQAAALALLDGDAPGPLIVRWSLHGGFKYEQAKAKYEPFDKLVDEDPATRSALAELAARYAL
AGQPVIITINNKAEGSAPLSCVALAREIAAACAQWRSEAA
>Mature_439_residues
GDGRTRRNTPTQRQQRDEADGSHADGQFDLFGAPPDDARAAAAPFDDDHPAGAGERVTPGKHDAAQLAKSPARAGRASPR
PSSDQEPEPPAASGLLWDDPLPPATPPKKSRRQRGVPPAPVSAEVADVAAALPPNVRLGTSSWYFPGWDGIVYDGDFAQT
KLSREGLEAYGAHPLLKSVSLDRSFYGPLSVADYLRYAQQVPDDFRFVVKAPASVTDAVVRGRRGEPSGPNPTFLDAQLA
IREFVQPCIEGLGKKAGVLVFQFSPMPDQLLVEPAALIDRLSAFFAALPPLPLDADGTRYAIEIRDACLLTPRFIRALAA
LGVRYCVGLHARMPDPLRQAAALALLDGDAPGPLIVRWSLHGGFKYEQAKAKYEPFDKLVDEDPATRSALAELAARYALA
GQPVIITINNKAEGSAPLSCVALAREIAAACAQWRSEAA

Specific function: Unknown

COG id: COG1801

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47058; Mature: 46927

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDGRTRRNTPTQRQQRDEADGSHADGQFDLFGAPPDDARAAAAPFDDDHPAGAGERVTP
CCCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GKHDAAQLAKSPARAGRASPRPSSDQEPEPPAASGLLWDDPLPPATPPKKSRRQRGVPPA
CCCHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC
PVSAEVADVAAALPPNVRLGTSSWYFPGWDGIVYDGDFAQTKLSREGLEAYGAHPLLKSV
CCCHHHHHHHHHCCCCCEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHH
SLDRSFYGPLSVADYLRYAQQVPDDFRFVVKAPASVTDAVVRGRRGEPSGPNPTFLDAQL
HCCCHHCCCHHHHHHHHHHHHCCHHHEEEEECCCHHHHHHHHCCCCCCCCCCCCEEHHHH
AIREFVQPCIEGLGKKAGVLVFQFSPMPDQLLVEPAALIDRLSAFFAALPPLPLDADGTR
HHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCE
YAIEIRDACLLTPRFIRALAALGVRYCVGLHARMPDPLRQAAALALLDGDAPGPLIVRWS
EEEEECCHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCEEEEEE
LHGGFKYEQAKAKYEPFDKLVDEDPATRSALAELAARYALAGQPVIITINNKAEGSAPLS
CCCCCEEHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHH
CVALAREIAAACAQWRSEAA
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GDGRTRRNTPTQRQQRDEADGSHADGQFDLFGAPPDDARAAAAPFDDDHPAGAGERVTP
CCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GKHDAAQLAKSPARAGRASPRPSSDQEPEPPAASGLLWDDPLPPATPPKKSRRQRGVPPA
CCCHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC
PVSAEVADVAAALPPNVRLGTSSWYFPGWDGIVYDGDFAQTKLSREGLEAYGAHPLLKSV
CCCHHHHHHHHHCCCCCEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHH
SLDRSFYGPLSVADYLRYAQQVPDDFRFVVKAPASVTDAVVRGRRGEPSGPNPTFLDAQL
HCCCHHCCCHHHHHHHHHHHHCCHHHEEEEECCCHHHHHHHHCCCCCCCCCCCCEEHHHH
AIREFVQPCIEGLGKKAGVLVFQFSPMPDQLLVEPAALIDRLSAFFAALPPLPLDADGTR
HHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCE
YAIEIRDACLLTPRFIRALAALGVRYCVGLHARMPDPLRQAAALALLDGDAPGPLIVRWS
EEEEECCHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCEEEEEE
LHGGFKYEQAKAKYEPFDKLVDEDPATRSALAELAARYALAGQPVIITINNKAEGSAPLS
CCCCCEEHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHH
CVALAREIAAACAQWRSEAA
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA