| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
Click here to switch to the map view.
The map label for this gene is adk
Identifier: 115352647
GI number: 115352647
Start: 2859359
End: 2860021
Strand: Direct
Name: adk
Synonym: Bamb_2596
Alternate gene names: 115352647
Gene position: 2859359-2860021 (Clockwise)
Preceding gene: 115352646
Following gene: 115352648
Centisome position: 80.4
GC content: 64.56
Gene sequence:
>663_bases ATGCGTTTGATCCTGTTGGGCGCGCCCGGCGCGGGAAAGGGCACCCAGGCAAACTTCATCAAGGAAAAGTTCGGCATCCC GCAAATCTCGACGGGCGACATGCTGCGCGCGGCCGTCAAGGCCGGCTCGCCGCTCGGCGTCGAGGCGAAGGGCTACATGG ACGCCGGCAAGCTCGTGCCGGACGCGCTGATCATCGGCCTCGTGAAGGAGCGCCTGAAGGACGCCGACTGCGCGAACGGC TACCTGTTCGACGGCTTCCCGCGCACGATCGCGCAGGCTGACGCGATGAAGGACGCCGGCGTCGCGATCGACTACGTGCT CGAAATCGACGTTCCGTTCTCGGAAATCGTCGAGCGCATGAGCGGCCGCCGCACGCACCCGGCATCGGGCCGCACGTACC ACGTGAAGTTCAACCCGCCGAAGGTCGAGGGCAAGGACGACGTGACGGGCGAACCGCTGATCCAGCGCGACGACGACAAG GAAGAAACCGTCAAGAAGCGTCTCGAAGTGTACGAAGCGCAGACCAAGCCGCTGATCACGTACTACGGCGACTGGGCGCA GCGCGGCGAGGAAAACGGCCTGAAGGCCCCGCAGTATCGCAAGATCTCGGGTCTCGGCACCGTCGACGAAATCCGCGAAC GTGCGTTTGACGCACTGAAGTAA
Upstream 100 bases:
>100_bases CGCGTCAGACCGGTCCGCCGCGCGCCAGGCAAGCGCCGCGCACGCTGTCGCCGACACTTTCGCGTCTCGCCATACGAATC TACATTCTGGAGATATCACC
Downstream 100 bases:
>100_bases GCACCGCGTCGTGCACCCGCAAGCCGCCCTTTCCGGGCGGTTTTTTTCGTCTGCTCGATCCGCTTCGGCTAACGGGGATG CGCACGAGCGTGCCGGTCGC
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase [H]
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MRLILLGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGSPLGVEAKGYMDAGKLVPDALIIGLVKERLKDADCANG YLFDGFPRTIAQADAMKDAGVAIDYVLEIDVPFSEIVERMSGRRTHPASGRTYHVKFNPPKVEGKDDVTGEPLIQRDDDK EETVKKRLEVYEAQTKPLITYYGDWAQRGEENGLKAPQYRKISGLGTVDEIRERAFDALK
Sequences:
>Translated_220_residues MRLILLGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGSPLGVEAKGYMDAGKLVPDALIIGLVKERLKDADCANG YLFDGFPRTIAQADAMKDAGVAIDYVLEIDVPFSEIVERMSGRRTHPASGRTYHVKFNPPKVEGKDDVTGEPLIQRDDDK EETVKKRLEVYEAQTKPLITYYGDWAQRGEENGLKAPQYRKISGLGTVDEIRERAFDALK >Mature_220_residues MRLILLGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGSPLGVEAKGYMDAGKLVPDALIIGLVKERLKDADCANG YLFDGFPRTIAQADAMKDAGVAIDYVLEIDVPFSEIVERMSGRRTHPASGRTYHVKFNPPKVEGKDDVTGEPLIQRDDDK EETVKKRLEVYEAQTKPLITYYGDWAQRGEENGLKAPQYRKISGLGTVDEIRERAFDALK
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth [H]
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family [H]
Homologues:
Organism=Homo sapiens, GI7524346, Length=202, Percent_Identity=49.5049504950495, Blast_Score=201, Evalue=5e-52, Organism=Homo sapiens, GI4502013, Length=202, Percent_Identity=49.5049504950495, Blast_Score=201, Evalue=5e-52, Organism=Homo sapiens, GI19923437, Length=182, Percent_Identity=49.4505494505495, Blast_Score=187, Evalue=5e-48, Organism=Homo sapiens, GI310110345, Length=182, Percent_Identity=43.956043956044, Blast_Score=164, Evalue=5e-41, Organism=Homo sapiens, GI53832003, Length=182, Percent_Identity=43.956043956044, Blast_Score=164, Evalue=5e-41, Organism=Homo sapiens, GI8051579, Length=182, Percent_Identity=43.956043956044, Blast_Score=164, Evalue=5e-41, Organism=Homo sapiens, GI53832001, Length=182, Percent_Identity=43.956043956044, Blast_Score=164, Evalue=5e-41, Organism=Homo sapiens, GI22749187, Length=186, Percent_Identity=29.5698924731183, Blast_Score=104, Evalue=5e-23, Organism=Homo sapiens, GI4502011, Length=222, Percent_Identity=29.7297297297297, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI7706497, Length=217, Percent_Identity=30.4147465437788, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI28144899, Length=214, Percent_Identity=25.7009345794392, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI28144897, Length=214, Percent_Identity=25.7009345794392, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI237858799, Length=139, Percent_Identity=26.6187050359712, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI21450759, Length=139, Percent_Identity=26.6187050359712, Blast_Score=72, Evalue=4e-13, Organism=Escherichia coli, GI1786680, Length=212, Percent_Identity=66.0377358490566, Blast_Score=275, Evalue=1e-75, Organism=Caenorhabditis elegans, GI17552384, Length=186, Percent_Identity=46.7741935483871, Blast_Score=179, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17537943, Length=185, Percent_Identity=37.2972972972973, Blast_Score=134, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17567503, Length=211, Percent_Identity=32.2274881516588, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17533833, Length=223, Percent_Identity=29.5964125560538, Blast_Score=87, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17550688, Length=184, Percent_Identity=30.4347826086957, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6320432, Length=194, Percent_Identity=47.4226804123711, Blast_Score=190, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6321018, Length=184, Percent_Identity=47.2826086956522, Blast_Score=160, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6322828, Length=183, Percent_Identity=30.6010928961749, Blast_Score=83, Evalue=4e-17, Organism=Drosophila melanogaster, GI22026816, Length=184, Percent_Identity=54.3478260869565, Blast_Score=200, Evalue=5e-52, Organism=Drosophila melanogaster, GI17737899, Length=182, Percent_Identity=47.2527472527472, Blast_Score=169, Evalue=1e-42, Organism=Drosophila melanogaster, GI24645822, Length=182, Percent_Identity=47.2527472527472, Blast_Score=169, Evalue=1e-42, Organism=Drosophila melanogaster, GI24663208, Length=179, Percent_Identity=28.4916201117318, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI17647141, Length=179, Percent_Identity=28.4916201117318, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI221459597, Length=184, Percent_Identity=29.8913043478261, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI21356893, Length=184, Percent_Identity=29.8913043478261, Blast_Score=75, Evalue=3e-14,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006259 - InterPro: IPR000850 - InterPro: IPR007862 [H]
Pfam domain/function: PF00406 ADK; PF05191 ADK_lid [H]
EC number: =2.7.4.3 [H]
Molecular weight: Translated: 24157; Mature: 24157
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLILLGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGSPLGVEAKGYMDAGKLVP CEEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHH DALIIGLVKERLKDADCANGYLFDGFPRTIAQADAMKDAGVAIDYVLEIDVPFSEIVERM HHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHH SGRRTHPASGRTYHVKFNPPKVEGKDDVTGEPLIQRDDDKEETVKKRLEVYEAQTKPLIT HCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE YYGDWAQRGEENGLKAPQYRKISGLGTVDEIRERAFDALK EECCHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MRLILLGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGSPLGVEAKGYMDAGKLVP CEEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHH DALIIGLVKERLKDADCANGYLFDGFPRTIAQADAMKDAGVAIDYVLEIDVPFSEIVERM HHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHH SGRRTHPASGRTYHVKFNPPKVEGKDDVTGEPLIQRDDDKEETVKKRLEVYEAQTKPLIT HCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE YYGDWAQRGEENGLKAPQYRKISGLGTVDEIRERAFDALK EECCHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA