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The map label for this gene is ycaR [C]

Identifier: 115352645

GI number: 115352645

Start: 2858035

End: 2858238

Strand: Direct

Name: ycaR [C]

Synonym: Bamb_2594

Alternate gene names: 115352645

Gene position: 2858035-2858238 (Clockwise)

Preceding gene: 115352644

Following gene: 115352646

Centisome position: 80.36

GC content: 67.65

Gene sequence:

>204_bases
GTGGACGCTCGCCTGCTTGAAATCCTTGTGTGCCCTATCTGCAAAGGCCCGCTCCACTATGACCGCGCCGCGCAGGAGCT
GATCTGCAACGCGGACAAGCTCGCCTACCCGATCCGCGACGGCATCCCCGTGATGCTCGTCGACGAAGCACGCCAGACCG
TCGAAGGCACGCCGGTCGACCCCGCCGGCCCGGCCGGCAGCTGA

Upstream 100 bases:

>100_bases
GTAAAATTGGGCGCTTCCTGGCGCGACGCTCGGCTGTGGGTCGTCCCCGTCGAAGCCGCGCTCGATCCTCGCCTCATTGC
CCTCGTTGTGGAGAAACTCC

Downstream 100 bases:

>100_bases
ACGCCGCACCGCTGCACCGGCACGCGGCCGCCGCGGTTCGCCGCGGCCGCATGCCGAACCCTGCCGGGCGGCCTGCTTTC
GACGCGTCGCCCGCCCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MDARLLEILVCPICKGPLHYDRAAQELICNADKLAYPIRDGIPVMLVDEARQTVEGTPVDPAGPAGS

Sequences:

>Translated_67_residues
MDARLLEILVCPICKGPLHYDRAAQELICNADKLAYPIRDGIPVMLVDEARQTVEGTPVDPAGPAGS
>Mature_67_residues
MDARLLEILVCPICKGPLHYDRAAQELICNADKLAYPIRDGIPVMLVDEARQTVEGTPVDPAGPAGS

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family [H]

Homologues:

Organism=Escherichia coli, GI1787146, Length=51, Percent_Identity=62.7450980392157, Blast_Score=74, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005651 [H]

Pfam domain/function: PF03966 Trm112p [H]

EC number: NA

Molecular weight: Translated: 7188; Mature: 7188

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDARLLEILVCPICKGPLHYDRAAQELICNADKLAYPIRDGIPVMLVDEARQTVEGTPVD
CCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCEEEECCCHHHCCCCCCC
PAGPAGS
CCCCCCC
>Mature Secondary Structure
MDARLLEILVCPICKGPLHYDRAAQELICNADKLAYPIRDGIPVMLVDEARQTVEGTPVD
CCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCEEEECCCHHHCCCCCCC
PAGPAGS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA