The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352641

Identifier: 115352641

GI number: 115352641

Start: 2852984

End: 2854261

Strand: Direct

Name: 115352641

Synonym: Bamb_2590

Alternate gene names: NA

Gene position: 2852984-2854261 (Clockwise)

Preceding gene: 115352640

Following gene: 115352644

Centisome position: 80.22

GC content: 71.99

Gene sequence:

>1278_bases
TTGCGTTCCCGCCGTCATGGCATTGCGCTATCGTGGCGGCTCGTTTCCCCCTCCCCCGACCCGCACTTGAACACGTCGAC
CGTCACCGCCCCGTCCCGCCACGCCTGGCCCGTGTTCGTCGCGTTCCTGCGGCTCGGCCTCACGTCGTTCGGCGGCCCCG
TCGCGCATCTCGGCTACTTCCGCGATACGTTCGTCACGCGGCGCAGCTGGCTGACCGAGCGCGCGTATGCCGACCTCGTC
GGGCTGTGCCAGTTCCTGCCGGGGCCGGCGAGCAGCCAGGTCGGGATGGCGATCGGACTGTCGCGCGCGGGCTATGCGGG
GATGTTCGCCGCGTGGCTCGGCTTCACGTTGCCGTCGGCGCTGCTGATGATGCTGTTCGCGCTCGGCGTGCATGCGACGG
GCATGCCGGTCGCCGCCGGCGCGCTGCACGGGCTGCGCATCGTGTCGGTCGCGGTGATCGCGCAGGCGGTATGGGGCATG
GCGCGCACGCTGTGCCCGGATGCGCGCCGCGTCACGCTGATGGCGATCGCGGCCTCCATCGCGCTGCTCGTGCCGGCCGC
GTGGCTGCAGGTTGCCGTGATCGTCGCGGCGGGTGCAGCCGGTCTCGTGCTGTTGCCGCAGCCCGAGCGCGGCGCGCACG
AGCCGTTGCCGCTGCATTTGTCGCACCGCGCGGGCGTGCTGTGGCTCGCGCTGTTCGCCGCGCTGATCGTCGTGTTGCCG
TTCGCGGCCCGCGCGTTCCATTCGAACACGCTCGCCGTCGTCGACGCGTTCTTCCGCACCGGTGCGCTGGTGTTCGGCGG
CGGCCACGTGGTGCTGCCGCTGCTGCAGGCCGCCGTCGTCGCGCCGGGCTGGGTCGGCGATTCGGCATTTCTGGCCGGCT
ACGGTGTCGCGCAGGCCGTGCCGGGGCCACTCTTCACCTTTGCGGCCTTCCTCGGTGCTTCGCTGCGCGATGCGCCGAAC
GGCTGGCTCGGCGGGACGATCGCGCTCGTGTCGATCTTCGCGCCGTCGTTCCTGCTCGTGGCCGGCACCGCGCCGTTCTG
GGAACGCCTGCGCCGCAGCACGCGCATGCAGGCCGCGCTCGCGGGCGTGAACGCGGCCGTCGTCGGCCTGCTGCTCGCCG
CGCTCTATCACCCGGTATGGACCGACACGATCGTGTCGCCTGGCGATTTCGCGGCCGCACTTGTCGCGTTCGTCGCGCTG
GTGTTCTGGCGCGTGCCGCCGTGGGCGGTCGTGATCGCAAGCGCGGCGCTCGGATGGTTGGCGGGGGTGATTGCCTGA

Upstream 100 bases:

>100_bases
CGTCGACGCGCTGCGCCGCGCGAGCGGATTACCCGCCAGCACGGACTGACACCACCGCGCAAGCGCAACAACCGCAACAA
TAGCAGCAAGCGCCGCAACA

Downstream 100 bases:

>100_bases
TCCGGCGAATGTCGGGTGTCGATTCACGTCCGACGAAAACAAAAAAGCCCTCGTGACGAGGGCTTTTTTTACGGTGCCGC
GCGCCGCTTAGGCGCGCAGG

Product: chromate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MRSRRHGIALSWRLVSPSPDPHLNTSTVTAPSRHAWPVFVAFLRLGLTSFGGPVAHLGYFRDTFVTRRSWLTERAYADLV
GLCQFLPGPASSQVGMAIGLSRAGYAGMFAAWLGFTLPSALLMMLFALGVHATGMPVAAGALHGLRIVSVAVIAQAVWGM
ARTLCPDARRVTLMAIAASIALLVPAAWLQVAVIVAAGAAGLVLLPQPERGAHEPLPLHLSHRAGVLWLALFAALIVVLP
FAARAFHSNTLAVVDAFFRTGALVFGGGHVVLPLLQAAVVAPGWVGDSAFLAGYGVAQAVPGPLFTFAAFLGASLRDAPN
GWLGGTIALVSIFAPSFLLVAGTAPFWERLRRSTRMQAALAGVNAAVVGLLLAALYHPVWTDTIVSPGDFAAALVAFVAL
VFWRVPPWAVVIASAALGWLAGVIA

Sequences:

>Translated_425_residues
MRSRRHGIALSWRLVSPSPDPHLNTSTVTAPSRHAWPVFVAFLRLGLTSFGGPVAHLGYFRDTFVTRRSWLTERAYADLV
GLCQFLPGPASSQVGMAIGLSRAGYAGMFAAWLGFTLPSALLMMLFALGVHATGMPVAAGALHGLRIVSVAVIAQAVWGM
ARTLCPDARRVTLMAIAASIALLVPAAWLQVAVIVAAGAAGLVLLPQPERGAHEPLPLHLSHRAGVLWLALFAALIVVLP
FAARAFHSNTLAVVDAFFRTGALVFGGGHVVLPLLQAAVVAPGWVGDSAFLAGYGVAQAVPGPLFTFAAFLGASLRDAPN
GWLGGTIALVSIFAPSFLLVAGTAPFWERLRRSTRMQAALAGVNAAVVGLLLAALYHPVWTDTIVSPGDFAAALVAFVAL
VFWRVPPWAVVIASAALGWLAGVIA
>Mature_425_residues
MRSRRHGIALSWRLVSPSPDPHLNTSTVTAPSRHAWPVFVAFLRLGLTSFGGPVAHLGYFRDTFVTRRSWLTERAYADLV
GLCQFLPGPASSQVGMAIGLSRAGYAGMFAAWLGFTLPSALLMMLFALGVHATGMPVAAGALHGLRIVSVAVIAQAVWGM
ARTLCPDARRVTLMAIAASIALLVPAAWLQVAVIVAAGAAGLVLLPQPERGAHEPLPLHLSHRAGVLWLALFAALIVVLP
FAARAFHSNTLAVVDAFFRTGALVFGGGHVVLPLLQAAVVAPGWVGDSAFLAGYGVAQAVPGPLFTFAAFLGASLRDAPN
GWLGGTIALVSIFAPSFLLVAGTAPFWERLRRSTRMQAALAGVNAAVVGLLLAALYHPVWTDTIVSPGDFAAALVAFVAL
VFWRVPPWAVVIASAALGWLAGVIA

Specific function: Unknown

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003370
- InterPro:   IPR014047 [H]

Pfam domain/function: PF02417 Chromate_transp [H]

EC number: NA

Molecular weight: Translated: 44439; Mature: 44439

Theoretical pI: Translated: 11.79; Mature: 11.79

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSRRHGIALSWRLVSPSPDPHLNTSTVTAPSRHAWPVFVAFLRLGLTSFGGPVAHLGYF
CCCCCCCCEEEEEEECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
RDTFVTRRSWLTERAYADLVGLCQFLPGPASSQVGMAIGLSRAGYAGMFAAWLGFTLPSA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHH
LLMMLFALGVHATGMPVAAGALHGLRIVSVAVIAQAVWGMARTLCPDARRVTLMAIAASI
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ALLVPAAWLQVAVIVAAGAAGLVLLPQPERGAHEPLPLHLSHRAGVLWLALFAALIVVLP
HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHH
FAARAFHSNTLAVVDAFFRTGALVFGGGHVVLPLLQAAVVAPGWVGDSAFLAGYGVAQAV
HHHHHHCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHC
PGPLFTFAAFLGASLRDAPNGWLGGTIALVSIFAPSFLLVAGTAPFWERLRRSTRMQAAL
CCHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHH
AGVNAAVVGLLLAALYHPVWTDTIVSPGDFAAALVAFVALVFWRVPPWAVVIASAALGWL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
AGVIA
HHHCC
>Mature Secondary Structure
MRSRRHGIALSWRLVSPSPDPHLNTSTVTAPSRHAWPVFVAFLRLGLTSFGGPVAHLGYF
CCCCCCCCEEEEEEECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
RDTFVTRRSWLTERAYADLVGLCQFLPGPASSQVGMAIGLSRAGYAGMFAAWLGFTLPSA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHH
LLMMLFALGVHATGMPVAAGALHGLRIVSVAVIAQAVWGMARTLCPDARRVTLMAIAASI
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ALLVPAAWLQVAVIVAAGAAGLVLLPQPERGAHEPLPLHLSHRAGVLWLALFAALIVVLP
HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHH
FAARAFHSNTLAVVDAFFRTGALVFGGGHVVLPLLQAAVVAPGWVGDSAFLAGYGVAQAV
HHHHHHCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHC
PGPLFTFAAFLGASLRDAPNGWLGGTIALVSIFAPSFLLVAGTAPFWERLRRSTRMQAAL
CCHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHH
AGVNAAVVGLLLAALYHPVWTDTIVSPGDFAAALVAFVALVFWRVPPWAVVIASAALGWL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
AGVIA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]