The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

Click here to switch to the map view.

The map label for this gene is ribC

Identifier: 115352609

GI number: 115352609

Start: 2815130

End: 2816167

Strand: Direct

Name: ribC

Synonym: Bamb_2558

Alternate gene names: 115352609

Gene position: 2815130-2816167 (Clockwise)

Preceding gene: 115352602

Following gene: 115352610

Centisome position: 79.15

GC content: 70.71

Gene sequence:

>1038_bases
TTGCGGCATTCCACCGCCCATTCCCCCGACGCTGCTTCCGCTATCGTGAAAGTCTTCCGCGGCCTGCCCAACGCCGAGAG
CCGCGCGCCGTGCGCGCTGACGATCGGCAACTTCGACGGTGTCCATCGCGGGCACCAGGCCCTGCTCGCACGCGTGCGCG
CGGCAGCGGACGCGCGCGGCCTGCCCGTGTGCGTGATGACGTTCGAGCCGCACCCGCGCGAATTCTTCAATCCGGCCGGC
GCGCCGCCGCGCATCGCGATGCTGCGCGACAAGCTGGAAGCGCTGCGCGAGCACGGGGTCGACCGCGTCGTCGTCGAGCA
CTTCAACCACACGTTCGCGAGCCAGTCGCCGCAGGCGTTCGTCGAACGCACGCTGGTCGGCGGGCTGCACACGCGCTGGA
TGATGGTCGGCGACGATTTCTGCTACGGCGCGAAGCGCGCGGGCACCTTCGACACGCTGAAGGCGGCCGGCGAACAGTAC
GGTTTCGAAGTCGAGCAGATGGGCACGGTCTCCGGCAGCGACGGCACGCGCATCTCCAGCTCCGGCGTGCGCGCCGCGCT
CGCCGCGGGCGATCTCGACGCGGCCGCGCAGGCGCTCGGCCACGGCTACGCGATCAGCGGCCACGTCGCACACGGGCTGA
AGCTCGGCCGCGACCTCGGCTTCCCGACCCTGAACCTGCCGATCGCGCACAAGCGGCCGGCGCTCGCGGGCATCTTCGTC
GTGCAGGTGCACGGGCTGGGCCCTGCCCCGCTGCCGGGCGTCGCGAGCCTCGGGCTGCGCCCGACCGTCGACGATTCCGG
CCGCGTGCTGCTCGAAGTCCACCTGCTCGACTGGCACGGCGATGCGTATGGCAAGCTGATCCGCGTCGAATTCCTGAAGA
AGCTGCGCGACGAGGCGAAGTTCGACGATCTCGAGGCGCTGTCGCGCGCGATCGCTTTGGACGTCGCGAATGCGCGTGCG
TACTTCGTCGAGCGCGAGCGCGCGCCGGGCAGCCGCGCGACCGGCTTCTCGACGTCGGCAACCGACCGAATTAGCTGA

Upstream 100 bases:

>100_bases
TCAGGATCACGAGTTTTTTCATCCGCGAATTTTACCATTCGCCCCCGCGTTTCCCTCCTTCTCGGCCGCCGGGCCGCCCG
AACGTTTATAATCTTCTGCT

Downstream 100 bases:

>100_bases
TCCGGCCGGCGGCGCCACGCGCCGCGCCCTCGCGCCGCCCACACGCGCGCATCCCCGATTCACGACGCACGAGCGTCCAC
CGATTTAGATAGCGATCCCA

Product: bifunctional riboflavin kinase/FMN adenylyltransferase

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MRHSTAHSPDAASAIVKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREFFNPAG
APPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPQAFVERTLVGGLHTRWMMVGDDFCYGAKRAGTFDTLKAAGEQY
GFEVEQMGTVSGSDGTRISSSGVRAALAAGDLDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFV
VQVHGLGPAPLPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKFDDLEALSRAIALDVANARA
YFVERERAPGSRATGFSTSATDRIS

Sequences:

>Translated_345_residues
MRHSTAHSPDAASAIVKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREFFNPAG
APPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPQAFVERTLVGGLHTRWMMVGDDFCYGAKRAGTFDTLKAAGEQY
GFEVEQMGTVSGSDGTRISSSGVRAALAAGDLDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFV
VQVHGLGPAPLPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKFDDLEALSRAIALDVANARA
YFVERERAPGSRATGFSTSATDRIS
>Mature_345_residues
MRHSTAHSPDAASAIVKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREFFNPAG
APPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPQAFVERTLVGGLHTRWMMVGDDFCYGAKRAGTFDTLKAAGEQY
GFEVEQMGTVSGSDGTRISSSGVRAALAAGDLDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFV
VQVHGLGPAPLPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAKFDDLEALSRAIALDVANARA
YFVERERAPGSRATGFSTSATDRIS

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Escherichia coli, GI1786208, Length=310, Percent_Identity=47.741935483871, Blast_Score=262, Evalue=2e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 36929; Mature: 36929

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHSTAHSPDAASAIVKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARG
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
LPVCVMTFEPHPREFFNPAGAPPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPQAF
CEEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH
VERTLVGGLHTRWMMVGDDFCYGAKRAGTFDTLKAAGEQYGFEVEQMGTVSGSDGTRISS
HHHHHHCCHHHEEEEECCCHHCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCEECC
SGVRAALAAGDLDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFV
CCCEEEHHHCCHHHHHHHHCCCEEEECHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEE
VQVHGLGPAPLPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAK
EEEECCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCC
FDDLEALSRAIALDVANARAYFVERERAPGSRATGFSTSATDRIS
CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRHSTAHSPDAASAIVKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARG
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
LPVCVMTFEPHPREFFNPAGAPPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPQAF
CEEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH
VERTLVGGLHTRWMMVGDDFCYGAKRAGTFDTLKAAGEQYGFEVEQMGTVSGSDGTRISS
HHHHHHCCHHHEEEEECCCHHCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCEECC
SGVRAALAAGDLDAAAQALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALAGIFV
CCCEEEHHHCCHHHHHHHHCCCEEEECHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEE
VQVHGLGPAPLPGVASLGLRPTVDDSGRVLLEVHLLDWHGDAYGKLIRVEFLKKLRDEAK
EEEECCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCC
FDDLEALSRAIALDVANARAYFVERERAPGSRATGFSTSATDRIS
CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]