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The map label for this gene is lptF [H]

Identifier: 115352567

GI number: 115352567

Start: 2773110

End: 2774201

Strand: Direct

Name: lptF [H]

Synonym: Bamb_2516

Alternate gene names: 115352567

Gene position: 2773110-2774201 (Clockwise)

Preceding gene: 115352563

Following gene: 115352568

Centisome position: 77.97

GC content: 63.55

Gene sequence:

>1092_bases
ATGATCTTCGAACGCTCCCTCCAGCGCGAGCTTGCGTATACGGCTGGCGCCGTGTTCATGGTGCTGCTCACGATCATGCT
CACGACGATGATGATCCGCATCGTCGGCTATGCCGCGTCCGGCGAAATCGATCCGCGGGACGTGCTCGTGCTGATCGGCC
TGACCGTGATCGGCTATCTCGCCGTGATGCTCGTCGTCACGCTGTTCGTGTCGATCCTGTTCGTGCTGACCCGGTGGTAC
CGGGACTCCGAAATGGTCGTCTGGCTCGCGTCCGGCGTCAGCCTCACGCGCCTGATCAAGCCGATCGGCGTGTTCGCCAC
GCCGCTCATCCTGCTGATCGCGTTCTTCGCGTTCGTCGGCTGGCCGTGGTCGAACCAGCAGAGCAAGATGATCAAGGCGC
GCTTCCAGCAGCGCGACGAGATCTCGCTGCTCGCGCCCGGCCAGTTCCGCGAATCGGCGTCGAACCATCGCGTGTTCTTC
ATCGAGAAGATGTCGCCTGACCAGAGCAAGGTGCAGAACGTGTTCGTCACGTCGACCGAGAACGGCAAGGTCAATATCGT
CGTATCGCACACGGGCCACACAGAAACGAAGGACGGCGATCGTTTCGTCGTGCTGGAAGATGGCCGCCGCTACGACGGCA
CGCCCGGCCAGCCGAACTTCAAGATCATGGAGTTCCAGCGCTACGGCGTGAAGATCACGAGCACCCCGGTCACCAACGTG
CCGACCACCAACAGCACGCCCACGCCGGACCTGCTGCGCAACCCGACGCGCGACAACCTCGCGGAATTCGCGTGGCGCGC
GGGCTTGCCGCTGATCGCGATCAACCTGATGGTGCTCGGCATCCCGCTGTCGTACCAGAACCCGCGCCGCAGCCGCACGA
TCAACCTCGTGATGGCCGTGCTGATCTACCTCACGTACTCGAACCTGCTGAACGTCGTGCAGGCGCAGATCGAGCAGGGC
AAGATGTCGTTCGGCGTCGGCCTGGTCGGCCTGCATGTGGTTGTCGCGGCGATCGTCGCGCTCATCTTCTGGTTGCGCGT
GCGCAACCGTCCGCTGTTGACACGCGCGCTGTTCGGCCGCTCGGGAGCATGA

Upstream 100 bases:

>100_bases
CTGGGCTAAGGATGAAAGCCGCAATTATCCGCTATTTTTCCCGTGGCGGCGCGAGCGCTCCACCACGCGTGCGCAGCCTC
CCGCCCTCTTCTCATCAAGA

Downstream 100 bases:

>100_bases
TCGATGCGGCTCTATGAAAAATACTTCGCGCGGCAGATCTACGTCACGTTCATCTTCATCCTGTTCGCGTTCTCGGGCCT
GTTCTTCTTCTTCGACCTGA

Product: permease YjgP/YjgQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MIFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLAVMLVVTLFVSILFVLTRWY
RDSEMVVWLASGVSLTRLIKPIGVFATPLILLIAFFAFVGWPWSNQQSKMIKARFQQRDEISLLAPGQFRESASNHRVFF
IEKMSPDQSKVQNVFVTSTENGKVNIVVSHTGHTETKDGDRFVVLEDGRRYDGTPGQPNFKIMEFQRYGVKITSTPVTNV
PTTNSTPTPDLLRNPTRDNLAEFAWRAGLPLIAINLMVLGIPLSYQNPRRSRTINLVMAVLIYLTYSNLLNVVQAQIEQG
KMSFGVGLVGLHVVVAAIVALIFWLRVRNRPLLTRALFGRSGA

Sequences:

>Translated_363_residues
MIFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLAVMLVVTLFVSILFVLTRWY
RDSEMVVWLASGVSLTRLIKPIGVFATPLILLIAFFAFVGWPWSNQQSKMIKARFQQRDEISLLAPGQFRESASNHRVFF
IEKMSPDQSKVQNVFVTSTENGKVNIVVSHTGHTETKDGDRFVVLEDGRRYDGTPGQPNFKIMEFQRYGVKITSTPVTNV
PTTNSTPTPDLLRNPTRDNLAEFAWRAGLPLIAINLMVLGIPLSYQNPRRSRTINLVMAVLIYLTYSNLLNVVQAQIEQG
KMSFGVGLVGLHVVVAAIVALIFWLRVRNRPLLTRALFGRSGA
>Mature_363_residues
MIFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLAVMLVVTLFVSILFVLTRWY
RDSEMVVWLASGVSLTRLIKPIGVFATPLILLIAFFAFVGWPWSNQQSKMIKARFQQRDEISLLAPGQFRESASNHRVFF
IEKMSPDQSKVQNVFVTSTENGKVNIVVSHTGHTETKDGDRFVVLEDGRRYDGTPGQPNFKIMEFQRYGVKITSTPVTNV
PTTNSTPTPDLLRNPTRDNLAEFAWRAGLPLIAINLMVLGIPLSYQNPRRSRTINLVMAVLIYLTYSNLLNVVQAQIEQG
KMSFGVGLVGLHVVVAAIVALIFWLRVRNRPLLTRALFGRSGA

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI1790712, Length=371, Percent_Identity=30.7277628032345, Blast_Score=118, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 40639; Mature: 40639

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AVMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPLILLIAFFAFVG
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
WPWSNQQSKMIKARFQQRDEISLLAPGQFRESASNHRVFFIEKMSPDQSKVQNVFVTSTE
CCCCCCHHHHHHHHHHCCCCEEEECCCHHHHCCCCCEEEEEECCCCCHHHHCEEEEEECC
NGKVNIVVSHTGHTETKDGDRFVVLEDGRRYDGTPGQPNFKIMEFQRYGVKITSTPVTNV
CCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCEEEECCCCCCC
PTTNSTPTPDLLRNPTRDNLAEFAWRAGLPLIAINLMVLGIPLSYQNPRRSRTINLVMAV
CCCCCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVVVAAIVALIFWLRVRNRPLLTRALFGR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
SGA
CCC
>Mature Secondary Structure
MIFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AVMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPLILLIAFFAFVG
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
WPWSNQQSKMIKARFQQRDEISLLAPGQFRESASNHRVFFIEKMSPDQSKVQNVFVTSTE
CCCCCCHHHHHHHHHHCCCCEEEECCCHHHHCCCCCEEEEEECCCCCHHHHCEEEEEECC
NGKVNIVVSHTGHTETKDGDRFVVLEDGRRYDGTPGQPNFKIMEFQRYGVKITSTPVTNV
CCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCEEEECCCCCCC
PTTNSTPTPDLLRNPTRDNLAEFAWRAGLPLIAINLMVLGIPLSYQNPRRSRTINLVMAV
CCCCCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVVVAAIVALIFWLRVRNRPLLTRALFGR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
SGA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]