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The map label for this gene is cyt [H]

Identifier: 115352563

GI number: 115352563

Start: 2769867

End: 2770196

Strand: Direct

Name: cyt [H]

Synonym: Bamb_2512

Alternate gene names: 115352563

Gene position: 2769867-2770196 (Clockwise)

Preceding gene: 115352562

Following gene: 115352567

Centisome position: 77.88

GC content: 68.79

Gene sequence:

>330_bases
ATGAAACAAACGATATCGCGCGCGCTGCTCGCGGCGCTGCTGACCGGCAGCGCGGCGGCCGCGCACGCCGACCTGGCCGG
CGACGGGCTCGCGCTCGCGCAGCGCAAGAACTGCGTGGCCTGCCATGCAGTCAGCAAGCCGCTGATGGGCCCGCCGTTCC
ACGACATCGCGGGCAAGTACGCGACGCGCGCCGACGCGGTCGATTACCTCGCGCAATCGATCGTAAAGGGCAGTATCGGG
GTATGGGGCAGCGTGCCGATGCCCGCCAATACGCAGCTGACGAGCGCCGAGGCGCACACGCTCGCGCAGTGGGTGATGTC
GCTGCATTGA

Upstream 100 bases:

>100_bases
ACTTCACGCGGCCGCCCAGGAAACGCGCAAAACGCGTTTCCCCTTTGCTTTTATAATGCGCGGACCGTGAAGCCGGCCGT
CCCCGCCGGCGGAGAACCGC

Downstream 100 bases:

>100_bases
GCCGGATGAACGGGCACCGCCCGGCTCTCTTCGACACGACCGGCCCGTAGATCGCCATCGACAAGGAACGGAACCACACT
CGCGTTCCCCTGCACGAAAC

Product: class I cytochrome c

Products: NA

Alternate protein names: Cytochrome c-551; Cytochrome c552 [H]

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MKQTISRALLAALLTGSAAAAHADLAGDGLALAQRKNCVACHAVSKPLMGPPFHDIAGKYATRADAVDYLAQSIVKGSIG
VWGSVPMPANTQLTSAEAHTLAQWVMSLH

Sequences:

>Translated_109_residues
MKQTISRALLAALLTGSAAAAHADLAGDGLALAQRKNCVACHAVSKPLMGPPFHDIAGKYATRADAVDYLAQSIVKGSIG
VWGSVPMPANTQLTSAEAHTLAQWVMSLH
>Mature_109_residues
MKQTISRALLAALLTGSAAAAHADLAGDGLALAQRKNCVACHAVSKPLMGPPFHDIAGKYATRADAVDYLAQSIVKGSIG
VWGSVPMPANTQLTSAEAHTLAQWVMSLH

Specific function: Monoheme c-type cytochrome. Probable electron donor to membrane cytochrome oxidase and to periplasmic nitrite reductase [H]

COG id: COG4654

COG function: function code C; Cytochrome c551/c552

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002324 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 11277; Mature: 11277

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQTISRALLAALLTGSAAAAHADLAGDGLALAQRKNCVACHAVSKPLMGPPFHDIAGKY
CCHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHH
ATRADAVDYLAQSIVKGSIGVWGSVPMPANTQLTSAEAHTLAQWVMSLH
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQTISRALLAALLTGSAAAAHADLAGDGLALAQRKNCVACHAVSKPLMGPPFHDIAGKY
CCHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHH
ATRADAVDYLAQSIVKGSIGVWGSVPMPANTQLTSAEAHTLAQWVMSLH
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746537; 12700255 [H]