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The map label for this gene is yhbQ [C]

Identifier: 115352512

GI number: 115352512

Start: 2710467

End: 2711357

Strand: Direct

Name: yhbQ [C]

Synonym: Bamb_2461

Alternate gene names: 115352512

Gene position: 2710467-2711357 (Clockwise)

Preceding gene: 115352511

Following gene: 115352514

Centisome position: 76.21

GC content: 69.14

Gene sequence:

>891_bases
ATGTCCTGGTTTCTGTATCTGATCGAATGCGCGGACGACAGCGTCTACACGGGCATCACGACCGATGTCGCAGCGCGCTT
CGACGAACACGCGTCCGGCAAGGGCGCGCGCTATACACGCTCGCGCAAGCCGCGCGCGGTGCTCGCGGCGTTTCCTCTGC
CCGACCGGTCCAGCGCGTCGCGCGCCGAATACTGGGTGAAGCGGCTCACGCCCGCGAAAAAGCGCGAGTTGGCGGCCGGC
TTGCGCACGCTCGAATCGGTGTTGCCGGCGGTGGTGGCGCTCGACGAGCGCAACGATGCGGCCGGGCCGAAGGCGATGGC
GCGCGGGCCCAAGAAGGGGCGCGCGAAAGACCTCGACGATGCGGCCAACGCGGCTGATACCGAACCGGTTGCCGGGAAAA
AGGCGAAGGCGGGGAAAGTCGCCGGGCCTGCAACGGCCGCGAAGACGGTGAAGACAGTGGAGACGGCGAAGCCTGCGAAA
GGCAAACAAGCGTCGAAGTCGACGCAATCGAACCCGGCCGCACCGGACGCGAAACGGGCGAAAGCCGACGGCCACGCCGC
CGCAAAAAAGACGTCGTTGCGTGGTACGCCGGTAAAGAAGGCCGGCCCGCCTCTAGCCGCGTCGCCAAAAAGGAAGGCAT
CGGCCGCCGTCGGCAAACCGGCAGCGAACGCACGCGAAGACGCCGCTTGCGCACCGACGCGGCGCCGTCCATCGACCGCG
CGACCCGCCGGAGCGACCGAAGCAACCAAGGCGACCCAGGCACCCACGTCACCCGCTGCCCCGCCCCGCGCGAAACGCAC
GAAGCAGGCGCCGGGTACCCCACGCCCGCAGGCGTCCGCGCCCGCCCGCCGGAAAACCGTGCGCACAAAACAAAACCGCG
CGGCCTCCTGA

Upstream 100 bases:

>100_bases
GGCGCGGCGCCGAGCCGCTTTCGCGACGGGCACGGCGACCGGTGGCGTTGACGCACGCTTTTTCTGAGACACTGGCGGCT
TCGCATCCCGCCGCCCTCCC

Downstream 100 bases:

>100_bases
GGAGACACGCGCGGTTTGCGTTCCGAACGAACCGGCGCGAGGCCGACCAACGGGCTTACTTCTTGTAGTTCGCGGCGCCG
TCGGTGATTTCCTTGTGCGC

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MSWFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTRSRKPRAVLAAFPLPDRSSASRAEYWVKRLTPAKKRELAAG
LRTLESVLPAVVALDERNDAAGPKAMARGPKKGRAKDLDDAANAADTEPVAGKKAKAGKVAGPATAAKTVKTVETAKPAK
GKQASKSTQSNPAAPDAKRAKADGHAAAKKTSLRGTPVKKAGPPLAASPKRKASAAVGKPAANAREDAACAPTRRRPSTA
RPAGATEATKATQAPTSPAAPPRAKRTKQAPGTPRPQASAPARRKTVRTKQNRAAS

Sequences:

>Translated_296_residues
MSWFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTRSRKPRAVLAAFPLPDRSSASRAEYWVKRLTPAKKRELAAG
LRTLESVLPAVVALDERNDAAGPKAMARGPKKGRAKDLDDAANAADTEPVAGKKAKAGKVAGPATAAKTVKTVETAKPAK
GKQASKSTQSNPAAPDAKRAKADGHAAAKKTSLRGTPVKKAGPPLAASPKRKASAAVGKPAANAREDAACAPTRRRPSTA
RPAGATEATKATQAPTSPAAPPRAKRTKQAPGTPRPQASAPARRKTVRTKQNRAAS
>Mature_295_residues
SWFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTRSRKPRAVLAAFPLPDRSSASRAEYWVKRLTPAKKRELAAGL
RTLESVLPAVVALDERNDAAGPKAMARGPKKGRAKDLDDAANAADTEPVAGKKAKAGKVAGPATAAKTVKTVETAKPAKG
KQASKSTQSNPAAPDAKRAKADGHAAAKKTSLRGTPVKKAGPPLAASPKRKASAAVGKPAANAREDAACAPTRRRPSTAR
PAGATEATKATQAPTSPAAPPRAKRTKQAPGTPRPQASAPARRKTVRTKQNRAAS

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

Organism=Escherichia coli, GI1789545, Length=77, Percent_Identity=51.9480519480519, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 30745; Mature: 30614

Theoretical pI: Translated: 11.51; Mature: 11.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTRSRKPRAVLAAFPLPDRSSAS
CCEEEEEEEECCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCHH
RAEYWVKRLTPAKKRELAAGLRTLESVLPAVVALDERNDAAGPKAMARGPKKGRAKDLDD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHH
AANAADTEPVAGKKAKAGKVAGPATAAKTVKTVETAKPAKGKQASKSTQSNPAAPDAKRA
HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHH
KADGHAAAKKTSLRGTPVKKAGPPLAASPKRKASAAVGKPAANAREDAACAPTRRRPSTA
HCCCHHHHHHCCCCCCCCHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
RPAGATEATKATQAPTSPAAPPRAKRTKQAPGTPRPQASAPARRKTVRTKQNRAAS
CCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SWFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTRSRKPRAVLAAFPLPDRSSAS
CEEEEEEEECCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCHH
RAEYWVKRLTPAKKRELAAGLRTLESVLPAVVALDERNDAAGPKAMARGPKKGRAKDLDD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHH
AANAADTEPVAGKKAKAGKVAGPATAAKTVKTVETAKPAKGKQASKSTQSNPAAPDAKRA
HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHH
KADGHAAAKKTSLRGTPVKKAGPPLAASPKRKASAAVGKPAANAREDAACAPTRRRPSTA
HCCCHHHHHHCCCCCCCCHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
RPAGATEATKATQAPTSPAAPPRAKRTKQAPGTPRPQASAPARRKTVRTKQNRAAS
CCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA