Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352486

Identifier: 115352486

GI number: 115352486

Start: 2683269

End: 2683649

Strand: Direct

Name: 115352486

Synonym: Bamb_2435

Alternate gene names: NA

Gene position: 2683269-2683649 (Clockwise)

Preceding gene: 115352484

Following gene: 115352487

Centisome position: 75.45

GC content: 70.08

Gene sequence:

>381_bases
ATGCAGCCCGAAACCGCCCGCCGTTTCGATACCGAATTCGCGCCGCGCATTGCGCGGGCGATCGCCGCCTTCTTCGCCGA
TCACGTCCAGGCCGACGTCGCCCCGTACGGCGGCCACGGGCAACCGACGCGCGTGCGGATCCGCAGCGCGCCACACGAGC
ACGTGAGCGGCTTCGTGCATCCGCTGAACCTCGAGTTGACCTGGGACACCGACGAGATCGAGCGGCTGATGGAGCCGGAC
GGTCCGCAGCGCTTCGAGCACTACCTGGCCGCGCTGCCGAAGAAACTGGGCGCGTGGCAGGGCGCGCGCGACATCGATCT
CGCGTCGCGCACGCAGGCCGACCCGCTCGTGCGGCTCGGCGGCCTCGATTTCGAAGGCTGA

Upstream 100 bases:

>100_bases
GTAATAGATGCAGCAAGTGGTAACGCGCCATTACGGGTATCACGCACACCGAAACGCGGTACGGCCGTGCTACGATTTTC
GGCCCACAGGAGACGCGTTC

Downstream 100 bases:

>100_bases
ATGCGCGCGCCGGCCGGTGGCCGGCGGCCCCGGGTGCGTCGACGTCGCGCGATGCGGCCCGGTGATACACTCGACCGGTC
CCGCGCCGGCGCCGCCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MQPETARRFDTEFAPRIARAIAAFFADHVQADVAPYGGHGQPTRVRIRSAPHEHVSGFVHPLNLELTWDTDEIERLMEPD
GPQRFEHYLAALPKKLGAWQGARDIDLASRTQADPLVRLGGLDFEG

Sequences:

>Translated_126_residues
MQPETARRFDTEFAPRIARAIAAFFADHVQADVAPYGGHGQPTRVRIRSAPHEHVSGFVHPLNLELTWDTDEIERLMEPD
GPQRFEHYLAALPKKLGAWQGARDIDLASRTQADPLVRLGGLDFEG
>Mature_126_residues
MQPETARRFDTEFAPRIARAIAAFFADHVQADVAPYGGHGQPTRVRIRSAPHEHVSGFVHPLNLELTWDTDEIERLMEPD
GPQRFEHYLAALPKKLGAWQGARDIDLASRTQADPLVRLGGLDFEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14111; Mature: 14111

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPETARRFDTEFAPRIARAIAAFFADHVQADVAPYGGHGQPTRVRIRSAPHEHVSGFVH
CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHCCCCC
PLNLELTWDTDEIERLMEPDGPQRFEHYLAALPKKLGAWQGARDIDLASRTQADPLVRLG
CCEEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEC
GLDFEG
CCCCCC
>Mature Secondary Structure
MQPETARRFDTEFAPRIARAIAAFFADHVQADVAPYGGHGQPTRVRIRSAPHEHVSGFVH
CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHCCCCC
PLNLELTWDTDEIERLMEPDGPQRFEHYLAALPKKLGAWQGARDIDLASRTQADPLVRLG
CCEEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEC
GLDFEG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA