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The map label for this gene is ydeK [H]

Identifier: 115352437

GI number: 115352437

Start: 2631398

End: 2632306

Strand: Direct

Name: ydeK [H]

Synonym: Bamb_2386

Alternate gene names: 115352437

Gene position: 2631398-2632306 (Clockwise)

Preceding gene: 115352436

Following gene: 115352438

Centisome position: 73.99

GC content: 70.96

Gene sequence:

>909_bases
ATGAATTCGCGCGAAACCCGGGGCATGCTGCTCGGCCTCATCGGCGTGATGATCTTCAGCCTGACGCTGCCGATGACGCG
TATCGTCGTCTCCGAACTCAACCCGCTGCTCAACGGGCTCGGCCGCGCGCTCGCCGCGTCGGTGCCGGCCGGCCTGCTGC
TGTGGTGGCGCCGCGAGAGGCTGCCGACCCGCGCGCAGCTGAAAAGCCTGGCCGTCGTCTCGGCCGGCGTGATCATCGCG
TATCCGGTGTTCTCCGCGTGGGCGATGAAAAGCGTGCCGGCGTCGCACGGCGCGGTCGTCAACGGCCTGCAGCCGCTGTT
CGTCGCGCTGTACGCGGCGTCGCTGTCGCACGAGCGCCCGTCGAAGGCGTTCTGGGCCAGCGCGCTGGCGGGCAGCGCGC
TCGTGATCGCGTTCGCGCTGCGCGACGGCGGCGGCACCGTGCAGGCGGGCGACGCGCTGATGCTCGTCGCGGTCGGCATC
GGCGCGCTCGGCTATGCGGAAGGCGCGCGGCTCGCGCGCCAGATCGGCGGCTGGCAGGTGATCTGCTGGGCGCTCGTCGT
GTCCGCGCCGTTCCTCGTGCTGCCGGTCGGCTGGCTCGCATGGACGCAGCACGTCGCCCATCCGGCCCCGCTTGCGTTGC
GCACGTGGCTCGCGTTTGGCTACGTGACCCTTTTTTCGCAATTCATCGGCTTTTTCGCGTGGTACGCGGGGCTCGCGATG
GGCGGCATCGCGCGCGTCGGCCAGGTCCAACTGCTGCAGATCTTCTTCACGATCGCCTTCTCCGCGCTGCTGTTCGGCGA
GACGGTGACGCCGTCCACCTGGCTGTTCGCGGCCGCCGTGATCGCGACCGTGATGCTCGGCCGGCGCTCGGCCGTGGCCA
CGGCCCCGCGTGCTGCTCGCGCCGGTTGA

Upstream 100 bases:

>100_bases
TCGACACGCCGCAAGGCGCCCGCACGCTGCGCTGACGGCCCGGCCACCCCTTCGATTACACGAACCTAGCCAAACCCAGC
AATCCGGAGACACCCAGTAC

Downstream 100 bases:

>100_bases
TGAGGTGCGCCATAATGTTTGTTTTGCCAGAACGGTTTTGCCCACCCGGCCGCGACGGCCCGATCGCGCTCCCGCAAGCC
TACCCGGCCGCGTCGACGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MNSRETRGMLLGLIGVMIFSLTLPMTRIVVSELNPLLNGLGRALAASVPAGLLLWWRRERLPTRAQLKSLAVVSAGVIIA
YPVFSAWAMKSVPASHGAVVNGLQPLFVALYAASLSHERPSKAFWASALAGSALVIAFALRDGGGTVQAGDALMLVAVGI
GALGYAEGARLARQIGGWQVICWALVVSAPFLVLPVGWLAWTQHVAHPAPLALRTWLAFGYVTLFSQFIGFFAWYAGLAM
GGIARVGQVQLLQIFFTIAFSALLFGETVTPSTWLFAAAVIATVMLGRRSAVATAPRAARAG

Sequences:

>Translated_302_residues
MNSRETRGMLLGLIGVMIFSLTLPMTRIVVSELNPLLNGLGRALAASVPAGLLLWWRRERLPTRAQLKSLAVVSAGVIIA
YPVFSAWAMKSVPASHGAVVNGLQPLFVALYAASLSHERPSKAFWASALAGSALVIAFALRDGGGTVQAGDALMLVAVGI
GALGYAEGARLARQIGGWQVICWALVVSAPFLVLPVGWLAWTQHVAHPAPLALRTWLAFGYVTLFSQFIGFFAWYAGLAM
GGIARVGQVQLLQIFFTIAFSALLFGETVTPSTWLFAAAVIATVMLGRRSAVATAPRAARAG
>Mature_302_residues
MNSRETRGMLLGLIGVMIFSLTLPMTRIVVSELNPLLNGLGRALAASVPAGLLLWWRRERLPTRAQLKSLAVVSAGVIIA
YPVFSAWAMKSVPASHGAVVNGLQPLFVALYAASLSHERPSKAFWASALAGSALVIAFALRDGGGTVQAGDALMLVAVGI
GALGYAEGARLARQIGGWQVICWALVVSAPFLVLPVGWLAWTQHVAHPAPLALRTWLAFGYVTLFSQFIGFFAWYAGLAM
GGIARVGQVQLLQIFFTIAFSALLFGETVTPSTWLFAAAVIATVMLGRRSAVATAPRAARAG

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31926; Mature: 31926

Theoretical pI: Translated: 11.86; Mature: 11.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSRETRGMLLGLIGVMIFSLTLPMTRIVVSELNPLLNGLGRALAASVPAGLLLWWRRER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
LPTRAQLKSLAVVSAGVIIAYPVFSAWAMKSVPASHGAVVNGLQPLFVALYAASLSHERP
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
SKAFWASALAGSALVIAFALRDGGGTVQAGDALMLVAVGIGALGYAEGARLARQIGGWQV
HHHHHHHHHCCCHHEEEEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ICWALVVSAPFLVLPVGWLAWTQHVAHPAPLALRTWLAFGYVTLFSQFIGFFAWYAGLAM
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGIARVGQVQLLQIFFTIAFSALLFGETVTPSTWLFAAAVIATVMLGRRSAVATAPRAAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCHHC
AG
CC
>Mature Secondary Structure
MNSRETRGMLLGLIGVMIFSLTLPMTRIVVSELNPLLNGLGRALAASVPAGLLLWWRRER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
LPTRAQLKSLAVVSAGVIIAYPVFSAWAMKSVPASHGAVVNGLQPLFVALYAASLSHERP
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
SKAFWASALAGSALVIAFALRDGGGTVQAGDALMLVAVGIGALGYAEGARLARQIGGWQV
HHHHHHHHHCCCHHEEEEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ICWALVVSAPFLVLPVGWLAWTQHVAHPAPLALRTWLAFGYVTLFSQFIGFFAWYAGLAM
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGIARVGQVQLLQIFFTIAFSALLFGETVTPSTWLFAAAVIATVMLGRRSAVATAPRAAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCHHC
AG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]