Click here to switch to the map view.

The map label for this gene is 115352400

Identifier: 115352400

GI number: 115352400

Start: 2586129

End: 2587409

Strand: Direct

Name: 115352400

Synonym: Bamb_2349

Alternate gene names: NA

Gene position: 2586129-2587409 (Clockwise)

Preceding gene: 115352399

Following gene: 115352404

Centisome position: 72.71

GC content: 68.93

Gene sequence:

>1281_bases
ATGCTTTCGTTTTCCGCTCCCGCCACGCGGCGCCTGACCGCCGCCCGCGCCTTCGCCGTCATCGCGCTCTGCATGGTGCC
CGTCTCGACCGCGCTGACCAACGTGTTCTGCGGGCTGTTCGCGGCCGCGCTCGTGATCTCCCCCGAATTCTGGCGCGACC
TGCGCTCGTTCGTCACCGACCCGGCGTCGCTCTCCGCGCTCCTCATCCTCGCGGCGCTGACCGCGAGCATCACCTATACC
GTCGCGCCGCACCCGAAGGCGTGGAACTGGATCGGCAAGTACGACAAGCTGCTGCTGCTGCCGTTTGCGGTGCTCGCGTT
CCGCCATTCGAACTGGGCGCCGATCGTGCGGCGCGCGTGGTTCGGCACGCTGTGCGTGATCCTGTTGCTGTCGACCACCA
ACTATCTCGGCCTGACCGCGATCGGGCCCGCGCATGCGAGCGACCTGCCGCTGTCGCGCGCGTGGGTGTTCAAGAACCAC
ATCGCGGCCGGCATGTTCGGCGCGCTGCTGTTCTATCAGGCCGCCGACCTCGCGCTGTCGGCCCGCACCGCGCTGTCGCG
CGCCGCGTATGGCGCCGTCGCCGCCTGGTCGTTGATCAACGTGTTCGTGATGCTGCAGGGGCGCACCGGGCAGGTCATCG
CGCTGCTGCTGATCCTCGTCGTCGCGGTGCGTTTCGTGTTGCTGCTGCGCCGCCAGTCGGCGTTGCGCGCCACCCTCGCC
GCCGGAACGCTGGTGCTGGCCGGCGTCGCGCTGGTCGCTGCCGCGTGCACGATGCACAACGGCCGCCTCGTGAAGGTCGT
GACGGAAGTGCAGCAGTATCGGCAGACCGATGCGGCCACGTCGACCGGGCTGCGTCTCGAGTGGTACAAGAAGGGGCTCG
AGCTGTATCGCATGCGCCCCGTGATCGGCTACGGCGCGGGCGGTCTCGAGTTCGAGTTCGAGAAGCTCACGGCGGGCAAG
ACGGCCGCCGAAGGCCAGCTCACGTCGAACCCGCATAACGAATATCTGCTGATGGCCGTGCAGCTCGGCACGCTCGGGGT
CCTGCTGTTCGTGAACCTGATCGTGCAGATCGCGCGCGGCAGCCGCGCGCTCGACCCGCGTTCGCAGCACCTGCTGCTCG
GATGGCTCGCGATCTTCGCGATCGGCAGCCTCGCGAATTCGCTGCTGCTCGATTTCGCCGAAGGCCACCTGCTGGTGCTG
CTCGCGGGCATCCTGCTCGGCTGCGCCGAGCGCGGCGAAGCGCTGCCGCGCGAGACGTCGGCGATCCGGCGCAGCGCGTA
A

Upstream 100 bases:

>100_bases
TCGCGTATACTGCGCGCTTCGTCCCGGGCACTGCCGCCGCGGGGCGCGCGGCGCGCAGCACGGTGCCCGCATGCCGCATT
CGTCCATTCGACAGGTTCCG

Downstream 100 bases:

>100_bases
CGCGTCACGCGCGGGGCTGGTGGGCTAGCCGGGCTGGCGAGCTGGCGAGCGGCGGATGTTGCCGCTCACCTCGGCTCGTC
TTCGATGATGGCGCCGCGCG

Product: O-antigen polymerase

Products: NA

Alternate protein names: Lipid A Core -O-Antigen Ligase; Lipid A Core

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MLSFSAPATRRLTAARAFAVIALCMVPVSTALTNVFCGLFAAALVISPEFWRDLRSFVTDPASLSALLILAALTASITYT
VAPHPKAWNWIGKYDKLLLLPFAVLAFRHSNWAPIVRRAWFGTLCVILLLSTTNYLGLTAIGPAHASDLPLSRAWVFKNH
IAAGMFGALLFYQAADLALSARTALSRAAYGAVAAWSLINVFVMLQGRTGQVIALLLILVVAVRFVLLLRRQSALRATLA
AGTLVLAGVALVAAACTMHNGRLVKVVTEVQQYRQTDAATSTGLRLEWYKKGLELYRMRPVIGYGAGGLEFEFEKLTAGK
TAAEGQLTSNPHNEYLLMAVQLGTLGVLLFVNLIVQIARGSRALDPRSQHLLLGWLAIFAIGSLANSLLLDFAEGHLLVL
LAGILLGCAERGEALPRETSAIRRSA

Sequences:

>Translated_426_residues
MLSFSAPATRRLTAARAFAVIALCMVPVSTALTNVFCGLFAAALVISPEFWRDLRSFVTDPASLSALLILAALTASITYT
VAPHPKAWNWIGKYDKLLLLPFAVLAFRHSNWAPIVRRAWFGTLCVILLLSTTNYLGLTAIGPAHASDLPLSRAWVFKNH
IAAGMFGALLFYQAADLALSARTALSRAAYGAVAAWSLINVFVMLQGRTGQVIALLLILVVAVRFVLLLRRQSALRATLA
AGTLVLAGVALVAAACTMHNGRLVKVVTEVQQYRQTDAATSTGLRLEWYKKGLELYRMRPVIGYGAGGLEFEFEKLTAGK
TAAEGQLTSNPHNEYLLMAVQLGTLGVLLFVNLIVQIARGSRALDPRSQHLLLGWLAIFAIGSLANSLLLDFAEGHLLVL
LAGILLGCAERGEALPRETSAIRRSA
>Mature_426_residues
MLSFSAPATRRLTAARAFAVIALCMVPVSTALTNVFCGLFAAALVISPEFWRDLRSFVTDPASLSALLILAALTASITYT
VAPHPKAWNWIGKYDKLLLLPFAVLAFRHSNWAPIVRRAWFGTLCVILLLSTTNYLGLTAIGPAHASDLPLSRAWVFKNH
IAAGMFGALLFYQAADLALSARTALSRAAYGAVAAWSLINVFVMLQGRTGQVIALLLILVVAVRFVLLLRRQSALRATLA
AGTLVLAGVALVAAACTMHNGRLVKVVTEVQQYRQTDAATSTGLRLEWYKKGLELYRMRPVIGYGAGGLEFEFEKLTAGK
TAAEGQLTSNPHNEYLLMAVQLGTLGVLLFVNLIVQIARGSRALDPRSQHLLLGWLAIFAIGSLANSLLLDFAEGHLLVL
LAGILLGCAERGEALPRETSAIRRSA

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45877; Mature: 45877

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSFSAPATRRLTAARAFAVIALCMVPVSTALTNVFCGLFAAALVISPEFWRDLRSFVTD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
PASLSALLILAALTASITYTVAPHPKAWNWIGKYDKLLLLPFAVLAFRHSNWAPIVRRAW
HHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
FGTLCVILLLSTTNYLGLTAIGPAHASDLPLSRAWVFKNHIAAGMFGALLFYQAADLALS
HHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARTALSRAAYGAVAAWSLINVFVMLQGRTGQVIALLLILVVAVRFVLLLRRQSALRATLA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGTLVLAGVALVAAACTMHNGRLVKVVTEVQQYRQTDAATSTGLRLEWYKKGLELYRMRP
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
VIGYGAGGLEFEFEKLTAGKTAAEGQLTSNPHNEYLLMAVQLGTLGVLLFVNLIVQIARG
CEEECCCCCEEEHHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCC
SRALDPRSQHLLLGWLAIFAIGSLANSLLLDFAEGHLLVLLAGILLGCAERGEALPRETS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHH
AIRRSA
HHHCCC
>Mature Secondary Structure
MLSFSAPATRRLTAARAFAVIALCMVPVSTALTNVFCGLFAAALVISPEFWRDLRSFVTD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
PASLSALLILAALTASITYTVAPHPKAWNWIGKYDKLLLLPFAVLAFRHSNWAPIVRRAW
HHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
FGTLCVILLLSTTNYLGLTAIGPAHASDLPLSRAWVFKNHIAAGMFGALLFYQAADLALS
HHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARTALSRAAYGAVAAWSLINVFVMLQGRTGQVIALLLILVVAVRFVLLLRRQSALRATLA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGTLVLAGVALVAAACTMHNGRLVKVVTEVQQYRQTDAATSTGLRLEWYKKGLELYRMRP
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
VIGYGAGGLEFEFEKLTAGKTAAEGQLTSNPHNEYLLMAVQLGTLGVLLFVNLIVQIARG
CEEECCCCCEEEHHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCC
SRALDPRSQHLLLGWLAIFAIGSLANSLLLDFAEGHLLVLLAGILLGCAERGEALPRETS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHH
AIRRSA
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA