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The map label for this gene is ybeB [C]

Identifier: 115352387

GI number: 115352387

Start: 2573489

End: 2573929

Strand: Direct

Name: ybeB [C]

Synonym: Bamb_2336

Alternate gene names: 115352387

Gene position: 2573489-2573929 (Clockwise)

Preceding gene: 115352386

Following gene: 115352388

Centisome position: 72.36

GC content: 65.53

Gene sequence:

>441_bases
ATGGATATCCGCAAACTGCAGCGCGTGATCGTCGACGCACTCGAAGACATCAAGGCGCAAGACATCAAGGTGTTCAACAC
CAGCCATCTGACCGAACTGTTCGACCGCGTGATCGTCGCGTCGGGCACGTCGAACCGCCAGACCAAGGCACTCGCGTCGA
GCGTGCGCGACAAGGTCAAGGAAGCCGGCGGCGACATCGTCAGCTCCGAGGGCGAAGACACCGGCGAATGGGTGCTGGTC
GACTGCGGCGACGCCGTCGTGCACATCCTGCAACCGGCGCTGCGCCAGTATTACAACCTCGAGGAAATCTGGGGCGACAA
GCCCGTGCGGATGAAGCTCGGCGGCGGCAAGGACGGTTTCGCGACGGCCAGCGAAGGCGAGGACGACGAGGAAGAAGCGC
CCGCACGCCCGGCGCGCAAGACGGCGGCCCGCCGCCGCTGA

Upstream 100 bases:

>100_bases
ATCGCGCGTCACGCGCAAATGCCCGATGCGTCGGCCGAGCATGTGCCGGCCGCCGTCTGGGCCTATATTCTTCAACATCG
TCTCTACCATTCCTGATTCC

Downstream 100 bases:

>100_bases
GTCGCAGCGAGTCGTCCCGATGAAGCTTTTCATCCTCGCGGTCGGCCACAAGATGCCCGGCTGGATCGCGTCCGGCTTCG
ACGAATACACGAAGCGGATG

Product: iojap-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MDIRKLQRVIVDALEDIKAQDIKVFNTSHLTELFDRVIVASGTSNRQTKALASSVRDKVKEAGGDIVSSEGEDTGEWVLV
DCGDAVVHILQPALRQYYNLEEIWGDKPVRMKLGGGKDGFATASEGEDDEEEAPARPARKTAARRR

Sequences:

>Translated_146_residues
MDIRKLQRVIVDALEDIKAQDIKVFNTSHLTELFDRVIVASGTSNRQTKALASSVRDKVKEAGGDIVSSEGEDTGEWVLV
DCGDAVVHILQPALRQYYNLEEIWGDKPVRMKLGGGKDGFATASEGEDDEEEAPARPARKTAARRR
>Mature_146_residues
MDIRKLQRVIVDALEDIKAQDIKVFNTSHLTELFDRVIVASGTSNRQTKALASSVRDKVKEAGGDIVSSEGEDTGEWVLV
DCGDAVVHILQPALRQYYNLEEIWGDKPVRMKLGGGKDGFATASEGEDDEEEAPARPARKTAARRR

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Escherichia coli, GI87081768, Length=101, Percent_Identity=33.6633663366337, Blast_Score=78, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 16096; Mature: 16096

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIRKLQRVIVDALEDIKAQDIKVFNTSHLTELFDRVIVASGTSNRQTKALASSVRDKVK
CCHHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EAGGDIVSSEGEDTGEWVLVDCGDAVVHILQPALRQYYNLEEIWGDKPVRMKLGGGKDGF
HHCCCEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCCCCCC
ATASEGEDDEEEAPARPARKTAARRR
CCCCCCCCCCHHCCCCHHHHHHHCCC
>Mature Secondary Structure
MDIRKLQRVIVDALEDIKAQDIKVFNTSHLTELFDRVIVASGTSNRQTKALASSVRDKVK
CCHHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EAGGDIVSSEGEDTGEWVLVDCGDAVVHILQPALRQYYNLEEIWGDKPVRMKLGGGKDGF
HHCCCEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCCCCCC
ATASEGEDDEEEAPARPARKTAARRR
CCCCCCCCCCHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]