The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352060

Identifier: 115352060

GI number: 115352060

Start: 2205547

End: 2205879

Strand: Direct

Name: 115352060

Synonym: Bamb_2009

Alternate gene names: NA

Gene position: 2205547-2205879 (Clockwise)

Preceding gene: 115352059

Following gene: 115352061

Centisome position: 62.01

GC content: 70.57

Gene sequence:

>333_bases
ATGCGATGCGCTCCCGTCTTGTCGGTTTCGCTGCTGGCCGTGCTGCTGACCGCTTGCGGCCAGCAGTCGGCCGAGAGCCT
GGTCGACGCCTTGACCGCCGATCCCGTGCGGCTCAAGGCGTTGCGTGCGCAGTGCGCGGACGGCCGGCAGGCCGTGGGCG
AAGACGACTGCCGCGCCGCCGCCGAAGCCTTCCGGCGGCGCTTCTTCTCCGGCCAGGCCGGGCCGGATGAATACCGGACG
CTAGCCGAGCTGCCGCCGATTCCAGCGAGCTTCGATGAACCCGACGACCGCGACGAGACGGCGGCTTTGCCTGCCTTGGA
GGACGCGCCATGA

Upstream 100 bases:

>100_bases
CCACCGAGCGCGCCCGCGAAGTGCGGCGGCGCTTCCTTCGCAGCGGCACGCCGTACACGCCGCAGTCCATCAATTTCTAC
AACAACTGACGGAGGCGGCC

Downstream 100 bases:

>100_bases
ACGACGTGACCATCATCGACCGATTCCTCGATACGTTCTCGCGCTACATCGACTCCGGGTTCGGGCTGCTGCAAGGCGAA
GTGGCGTTCCTGACAGCCAC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MRCAPVLSVSLLAVLLTACGQQSAESLVDALTADPVRLKALRAQCADGRQAVGEDDCRAAAEAFRRRFFSGQAGPDEYRT
LAELPPIPASFDEPDDRDETAALPALEDAP

Sequences:

>Translated_110_residues
MRCAPVLSVSLLAVLLTACGQQSAESLVDALTADPVRLKALRAQCADGRQAVGEDDCRAAAEAFRRRFFSGQAGPDEYRT
LAELPPIPASFDEPDDRDETAALPALEDAP
>Mature_110_residues
MRCAPVLSVSLLAVLLTACGQQSAESLVDALTADPVRLKALRAQCADGRQAVGEDDCRAAAEAFRRRFFSGQAGPDEYRT
LAELPPIPASFDEPDDRDETAALPALEDAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11701; Mature: 11701

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCAPVLSVSLLAVLLTACGQQSAESLVDALTADPVRLKALRAQCADGRQAVGEDDCRAA
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHH
AEAFRRRFFSGQAGPDEYRTLAELPPIPASFDEPDDRDETAALPALEDAP
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MRCAPVLSVSLLAVLLTACGQQSAESLVDALTADPVRLKALRAQCADGRQAVGEDDCRAA
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHH
AEAFRRRFFSGQAGPDEYRTLAELPPIPASFDEPDDRDETAALPALEDAP
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA