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The map label for this gene is 115352059

Identifier: 115352059

GI number: 115352059

Start: 2204798

End: 2205535

Strand: Direct

Name: 115352059

Synonym: Bamb_2008

Alternate gene names: NA

Gene position: 2204798-2205535 (Clockwise)

Preceding gene: 115352058

Following gene: 115352060

Centisome position: 61.99

GC content: 64.23

Gene sequence:

>738_bases
ATGAAGATCCGTGTGCTTTCCGCTTCGCTCGCCGCCGCGCTGGCCGGCTCGCTGATGCTCGCTCAGCCGGCGGCGGCGCT
GACCTTCGTTGATCCCGTCAACTTGGTGCAGAACACGCTGACCGCCATCCGCACCCTTGAGCAGATCAACAATCAGATCA
ATCAGCTTCAGAACGAAGCGCAGATGTTGATGAACCAGGCGCGCAACTTGGCGAATCTCGATTTCAACATCGTCAACCGC
CTGCGCTCCACGCTCGCCAGCACCGAACGCCTGATCGTCGAGGCGCAGGGACTGGCCTACGACGTGCAGAGCATGGATGC
CACGTTCGCCCGTCTGTACCCGGAGCAGTACGCCGCGACCATCAGCGGCGACCGCATGGCGCAGGACGCCCGCGAACGCT
GGAAGAACACGCTCGATGGCCTGCATACCGCGATGCGGATGCAGGCACAGGTGTCGCAGAACCTGGCACAAGACGAAAGC
GCACTGGCCGATCTGGTCAGCCAGAGCCAGTCCGCCACCGGCGCCTTGCAGGCGCAGCAGGCGACCAACCAGCTTCTTGC
CTTGCAGGCCAAGCAGTCCATCCAGTCCCAGCAACTCCAGATCACGCAAGACCGCGCGGCCTCGCTGGAACTGGCGCGGC
AGGCGGCGGCCACCGAGCGCGCCCGCGAAGTGCGGCGGCGCTTCCTTCGCAGCGGCACGCCGTACACGCCGCAGTCCATC
AATTTCTACAACAACTGA

Upstream 100 bases:

>100_bases
CGTGGCTGCGCCATCGCGGCCTCGACTGGGCCTCCGACCTGTTGCCGTCCTCACCGGCGGCCGCTTCGTTCCTCAACTCC
CAACCACTGGAGGTTTCGCC

Downstream 100 bases:

>100_bases
CGGAGGCGGCCATGCGATGCGCTCCCGTCTTGTCGGTTTCGCTGCTGGCCGTGCTGCTGACCGCTTGCGGCCAGCAGTCG
GCCGAGAGCCTGGTCGACGC

Product: conjugal transfer protein TrbJ

Products: NA

Alternate protein names: P-Type Conjugative Transfer Protein TrbJ; Conjugal Transfer TrbJ Signal Peptide Protein; Conjugal Transfer Protein Trbj; P-Type Conjugative Transfer Protein Trbj; Conjugative Transfer Protein TrbJ; Conjugal Transfer Protein

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKIRVLSASLAAALAGSLMLAQPAAALTFVDPVNLVQNTLTAIRTLEQINNQINQLQNEAQMLMNQARNLANLDFNIVNR
LRSTLASTERLIVEAQGLAYDVQSMDATFARLYPEQYAATISGDRMAQDARERWKNTLDGLHTAMRMQAQVSQNLAQDES
ALADLVSQSQSATGALQAQQATNQLLALQAKQSIQSQQLQITQDRAASLELARQAAATERAREVRRRFLRSGTPYTPQSI
NFYNN

Sequences:

>Translated_245_residues
MKIRVLSASLAAALAGSLMLAQPAAALTFVDPVNLVQNTLTAIRTLEQINNQINQLQNEAQMLMNQARNLANLDFNIVNR
LRSTLASTERLIVEAQGLAYDVQSMDATFARLYPEQYAATISGDRMAQDARERWKNTLDGLHTAMRMQAQVSQNLAQDES
ALADLVSQSQSATGALQAQQATNQLLALQAKQSIQSQQLQITQDRAASLELARQAAATERAREVRRRFLRSGTPYTPQSI
NFYNN
>Mature_245_residues
MKIRVLSASLAAALAGSLMLAQPAAALTFVDPVNLVQNTLTAIRTLEQINNQINQLQNEAQMLMNQARNLANLDFNIVNR
LRSTLASTERLIVEAQGLAYDVQSMDATFARLYPEQYAATISGDRMAQDARERWKNTLDGLHTAMRMQAQVSQNLAQDES
ALADLVSQSQSATGALQAQQATNQLLALQAKQSIQSQQLQITQDRAASLELARQAAATERAREVRRRFLRSGTPYTPQSI
NFYNN

Specific function: Unknown

COG id: COG5314

COG function: function code U; Conjugal transfer/entry exclusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27049; Mature: 27049

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRVLSASLAAALAGSLMLAQPAAALTFVDPVNLVQNTLTAIRTLEQINNQINQLQNEA
CEEEEHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QMLMNQARNLANLDFNIVNRLRSTLASTERLIVEAQGLAYDVQSMDATFARLYPEQYAAT
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ISGDRMAQDARERWKNTLDGLHTAMRMQAQVSQNLAQDESALADLVSQSQSATGALQAQQ
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ATNQLLALQAKQSIQSQQLQITQDRAASLELARQAAATERAREVRRRFLRSGTPYTPQSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NFYNN
CCCCC
>Mature Secondary Structure
MKIRVLSASLAAALAGSLMLAQPAAALTFVDPVNLVQNTLTAIRTLEQINNQINQLQNEA
CEEEEHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QMLMNQARNLANLDFNIVNRLRSTLASTERLIVEAQGLAYDVQSMDATFARLYPEQYAAT
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ISGDRMAQDARERWKNTLDGLHTAMRMQAQVSQNLAQDESALADLVSQSQSATGALQAQQ
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ATNQLLALQAKQSIQSQQLQITQDRAASLELARQAAATERAREVRRRFLRSGTPYTPQSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NFYNN
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA