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The map label for this gene is 115352036

Identifier: 115352036

GI number: 115352036

Start: 2181460

End: 2182293

Strand: Direct

Name: 115352036

Synonym: Bamb_1985

Alternate gene names: NA

Gene position: 2181460-2182293 (Clockwise)

Preceding gene: 115352035

Following gene: 115352037

Centisome position: 61.34

GC content: 66.67

Gene sequence:

>834_bases
ATGTCCAGCCCACGGCAGGAGCGCGAACAGCTCGATCTGTTCCATGCCTTGCCCGGCGACATGGCGCCGCGCGACAGCCA
GGACTTGATGGCCTTTCCGTTCTTCTCGCTGGCGAAGTCGCGGCGCACGGCGCCGATCGACTTTCGCAGCGGCAACGTCA
CCATCCGCGTGGAAGGCACGGCCGAGCACGGCATCGCCACGATATGGGATGCCGACGTTTTGATTTGGGCGGCCTCGCAG
ATCGTGGAGGCGCGCGACGCAGGCATTCGCCCGTCGCGCTGGATACGCGCCACGCCCTACGAGATCCTGCGCTTCATCGG
ACGCGGCACGTCGCTCAACGATTACCTGCGCCTGAAAGCCGCGCTCGACCGGCTGCAATCGACCAGCGTGGCGACTTCCA
TCCGCGAAACCACGGGAAGGCGGCTGCATCGCTTTTCATGGGTGAACGAATGGCGCGAGCTGGCCGACGCCAGCGGCGCG
CCGCTGGGCATCGAGCTGATCCTGCCGGACTGGTTCTATGCCGGCGTGCTCGACGCCGTCCTGGTGCTGACCATCGACCC
AGCCTATTTCCGCTTGAAGGGCGGCATCGAGCGCTGGCTGTACCGCCTGGTGCGCAAGCACGGCGGGCGGCAGGAGCACG
GCTGGCAATTCGACTTCCGGCACCTGCACCGCAAGTCCGGCAGCGCGGCGCGCTTCTCGGACTTCGCTTACGACCTGCGC
GTGCTGGTCGCACGGCAGTCGCTGCCCGGCTACGTCCTCGGCATCGAGCACATGCCCGGCGACAACATCGAACTGCTGAC
CTTTCGGCCCGTGTCGTTCGCGGCACGGGGATAA

Upstream 100 bases:

>100_bases
AGCGCAGCTACGAGGCCACGTCCGACCCGGAATACGCCGAGCGTCACGCGGGTGACTACCGTGATGGCCGCTGATCGTTG
GTTTGCCGGTAGCTGCCGTC

Downstream 100 bases:

>100_bases
CTGCGGGACAACGTGTGGACGGCCTCGTGCTATCAGGAGTACCGGGTATCGTGCTATCGGGAGTACGCCTATCGTGCTAT
CAGGAGTACGAAAACGCCGC

Product: putative replication initiator and transcription repressor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MSSPRQEREQLDLFHALPGDMAPRDSQDLMAFPFFSLAKSRRTAPIDFRSGNVTIRVEGTAEHGIATIWDADVLIWAASQ
IVEARDAGIRPSRWIRATPYEILRFIGRGTSLNDYLRLKAALDRLQSTSVATSIRETTGRRLHRFSWVNEWRELADASGA
PLGIELILPDWFYAGVLDAVLVLTIDPAYFRLKGGIERWLYRLVRKHGGRQEHGWQFDFRHLHRKSGSAARFSDFAYDLR
VLVARQSLPGYVLGIEHMPGDNIELLTFRPVSFAARG

Sequences:

>Translated_277_residues
MSSPRQEREQLDLFHALPGDMAPRDSQDLMAFPFFSLAKSRRTAPIDFRSGNVTIRVEGTAEHGIATIWDADVLIWAASQ
IVEARDAGIRPSRWIRATPYEILRFIGRGTSLNDYLRLKAALDRLQSTSVATSIRETTGRRLHRFSWVNEWRELADASGA
PLGIELILPDWFYAGVLDAVLVLTIDPAYFRLKGGIERWLYRLVRKHGGRQEHGWQFDFRHLHRKSGSAARFSDFAYDLR
VLVARQSLPGYVLGIEHMPGDNIELLTFRPVSFAARG
>Mature_276_residues
SSPRQEREQLDLFHALPGDMAPRDSQDLMAFPFFSLAKSRRTAPIDFRSGNVTIRVEGTAEHGIATIWDADVLIWAASQI
VEARDAGIRPSRWIRATPYEILRFIGRGTSLNDYLRLKAALDRLQSTSVATSIRETTGRRLHRFSWVNEWRELADASGAP
LGIELILPDWFYAGVLDAVLVLTIDPAYFRLKGGIERWLYRLVRKHGGRQEHGWQFDFRHLHRKSGSAARFSDFAYDLRV
LVARQSLPGYVLGIEHMPGDNIELLTFRPVSFAARG

Specific function: Unknown

COG id: COG5534

COG function: function code L; Plasmid replication initiator protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BRCT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001357
- InterPro:   IPR018777 [H]

Pfam domain/function: PF10134 RPA [H]

EC number: NA

Molecular weight: Translated: 31504; Mature: 31373

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPRQEREQLDLFHALPGDMAPRDSQDLMAFPFFSLAKSRRTAPIDFRSGNVTIRVEGT
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCEEEEEECC
AEHGIATIWDADVLIWAASQIVEARDAGIRPSRWIRATPYEILRFIGRGTSLNDYLRLKA
CCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHCCCCCHHHHHHHHH
ALDRLQSTSVATSIRETTGRRLHRFSWVNEWRELADASGAPLGIELILPDWFYAGVLDAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHH
LVLTIDPAYFRLKGGIERWLYRLVRKHGGRQEHGWQFDFRHLHRKSGSAARFSDFAYDLR
HHHEECCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHH
VLVARQSLPGYVLGIEHMPGDNIELLTFRPVSFAARG
HHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
SSPRQEREQLDLFHALPGDMAPRDSQDLMAFPFFSLAKSRRTAPIDFRSGNVTIRVEGT
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCEEEEEECC
AEHGIATIWDADVLIWAASQIVEARDAGIRPSRWIRATPYEILRFIGRGTSLNDYLRLKA
CCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHCCCCCHHHHHHHHH
ALDRLQSTSVATSIRETTGRRLHRFSWVNEWRELADASGAPLGIELILPDWFYAGVLDAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHH
LVLTIDPAYFRLKGGIERWLYRLVRKHGGRQEHGWQFDFRHLHRKSGSAARFSDFAYDLR
HHHEECCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHH
VLVARQSLPGYVLGIEHMPGDNIELLTFRPVSFAARG
HHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12219091 [H]