| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is envZ [H]
Identifier: 115351978
GI number: 115351978
Start: 2122178
End: 2123539
Strand: Direct
Name: envZ [H]
Synonym: Bamb_1927
Alternate gene names: 115351978
Gene position: 2122178-2123539 (Clockwise)
Preceding gene: 115351977
Following gene: 115351979
Centisome position: 59.67
GC content: 69.46
Gene sequence:
>1362_bases ATGCGTATCGACCGGCGCCTCCTGCAGCTCGCGTTCGGCGGGCTGTTCTGGCGCACCTTCCTGCTGATCGCGCTGCTGAT CTCGGTCAGTCTCGCCGCGTGGTTCCAGAGCTTTCGCGTGATCGAGCGCGAGCCGCGCGCGCAGCGCGTCGCGCTCCAGC TCGTCGCGATCGTGAAGCTCACGCGCACCGCCCTGCTCTATTCCGATCCCGATTTGCGGCGCGCGCTGCTGCAGGATCTC GAGAGCAACGAGGGCGTGCGCGTCTACCCGCGCGAAAAAACCGACAAGTTCAAGCTGCAGCCCGACGAATCGCTGAACCG TCTGATCGAACACGATATCCGCAGCCGGCTCGGCGACGAGACCGTGATCGCGCAGTCGGTCAACGACATCCCTGGCGTGT GGATCAGCTTCAAGATCGACGACGACGACTACTGGGTCGCGCTCGACCGCGACCAGCTCGACAGCGTCACGGGCCTTCAG TGGGCGGGCTGGGGCCTGTTCGCGCTCGCGCTGTCGCTGTTCGGCTCCGCGTTCATCACGAGCCTCGTGAACCGGCCGTT CTCGCGGCTCGCGCTCGCCGCGCGCCAGATCGGCTCGGGCCAGACGCCCGAGCTGCTGCCCGAGCGCGGGATGGGCGTCG CGGCCGAGACCAACCGCAGCTTCAACCAGATGGTGCGCGACCTCGAACAGCTCGAGGCCGATCGCGCGCTGATGCTCGCG GGCATCTCGCACGACCTGCGCACGCCGCTCGCGCGGCTGCGGCTCGAGACCGAGATGAGCCCGTCCGACCAGGCGACCAA GGATGCGATGGTCGACGACATCGAGCAGATGGACCGCATCATCGCCGCCTTCATCGACTACGCGCGCCCGTCCCAGCGCA AGCCGGAGCCGGTCGACCTGTCGTCGATCGCGCACGAAGTCGCCGCGCGCGTGTCGGGCGAGGACGGCGTCGAGATCCGC ACGCGGCTTGCGCCGAGCGCCGTGATCGAAGCCGACGAGACCGACATGCGCCGCGTGATCGGCAACCTCGTCGAGAACGC GCGCAAATACGGCCAGAGCCGGCAGGACGGCGTGTCGCGCATCACGCTCGAGACGCGCGTGACGCATGCGCGGGTCGAGC TGTCGGTGACCGACGAAGGCCCCGGCATCCCCGAGGATCAGCTGCCGCTCGTGATGCGGCCGTTCTACCGCGTCGACACG GCGCGCACCAAGGCGGACGGCACGGGGCTCGGGATGGCGATCGTGCTGCGCCTCGTCGGCCGCTACCGCGGCGCACTGCG CCTGCGCAACCGCAGCCCCGACGCGGGCCTCGAAGTCACGCTCGAATTCCCCGGCGCCGGCAAGGCGCGTGCGACGGCGT GA
Upstream 100 bases:
>100_bases CGTTTCATCCAGACTGTCTGGGGCCTCGGCTACGTGTTCATTCCGGACGGCGCCGCCTGATCTTTTTCCTTTCCGGTTTC GCCTGTCCTCGGCCCGTCCC
Downstream 100 bases:
>100_bases CGCGTTCGCGCATGCCGCTTGCGCGTCACACTATCGCTGCGGTTGAAAAAAACTATGGGAATCGTTAGTCAAAATCTATT GAATCGCTTGGTTAATAGTG
Product: periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MRIDRRLLQLAFGGLFWRTFLLIALLISVSLAAWFQSFRVIEREPRAQRVALQLVAIVKLTRTALLYSDPDLRRALLQDL ESNEGVRVYPREKTDKFKLQPDESLNRLIEHDIRSRLGDETVIAQSVNDIPGVWISFKIDDDDYWVALDRDQLDSVTGLQ WAGWGLFALALSLFGSAFITSLVNRPFSRLALAARQIGSGQTPELLPERGMGVAAETNRSFNQMVRDLEQLEADRALMLA GISHDLRTPLARLRLETEMSPSDQATKDAMVDDIEQMDRIIAAFIDYARPSQRKPEPVDLSSIAHEVAARVSGEDGVEIR TRLAPSAVIEADETDMRRVIGNLVENARKYGQSRQDGVSRITLETRVTHARVELSVTDEGPGIPEDQLPLVMRPFYRVDT ARTKADGTGLGMAIVLRLVGRYRGALRLRNRSPDAGLEVTLEFPGAGKARATA
Sequences:
>Translated_453_residues MRIDRRLLQLAFGGLFWRTFLLIALLISVSLAAWFQSFRVIEREPRAQRVALQLVAIVKLTRTALLYSDPDLRRALLQDL ESNEGVRVYPREKTDKFKLQPDESLNRLIEHDIRSRLGDETVIAQSVNDIPGVWISFKIDDDDYWVALDRDQLDSVTGLQ WAGWGLFALALSLFGSAFITSLVNRPFSRLALAARQIGSGQTPELLPERGMGVAAETNRSFNQMVRDLEQLEADRALMLA GISHDLRTPLARLRLETEMSPSDQATKDAMVDDIEQMDRIIAAFIDYARPSQRKPEPVDLSSIAHEVAARVSGEDGVEIR TRLAPSAVIEADETDMRRVIGNLVENARKYGQSRQDGVSRITLETRVTHARVELSVTDEGPGIPEDQLPLVMRPFYRVDT ARTKADGTGLGMAIVLRLVGRYRGALRLRNRSPDAGLEVTLEFPGAGKARATA >Mature_453_residues MRIDRRLLQLAFGGLFWRTFLLIALLISVSLAAWFQSFRVIEREPRAQRVALQLVAIVKLTRTALLYSDPDLRRALLQDL ESNEGVRVYPREKTDKFKLQPDESLNRLIEHDIRSRLGDETVIAQSVNDIPGVWISFKIDDDDYWVALDRDQLDSVTGLQ WAGWGLFALALSLFGSAFITSLVNRPFSRLALAARQIGSGQTPELLPERGMGVAAETNRSFNQMVRDLEQLEADRALMLA GISHDLRTPLARLRLETEMSPSDQATKDAMVDDIEQMDRIIAAFIDYARPSQRKPEPVDLSSIAHEVAARVSGEDGVEIR TRLAPSAVIEADETDMRRVIGNLVENARKYGQSRQDGVSRITLETRVTHARVELSVTDEGPGIPEDQLPLVMRPFYRVDT ARTKADGTGLGMAIVLRLVGRYRGALRLRNRSPDAGLEVTLEFPGAGKARATA
Specific function: Member of the two-component regulatory system envZ/ompR involved in the regulation of osmoregulation (genes ompF and ompC). EnvZ functions as a membrane-associated protein kinase that phosphorylates ompR in response to environmental signals [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1789808, Length=441, Percent_Identity=32.4263038548753, Blast_Score=177, Evalue=1e-45, Organism=Escherichia coli, GI1787894, Length=239, Percent_Identity=32.6359832635983, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1790346, Length=274, Percent_Identity=28.4671532846715, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1788393, Length=282, Percent_Identity=30.4964539007092, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1786600, Length=218, Percent_Identity=28.8990825688073, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790551, Length=285, Percent_Identity=27.3684210526316, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1790436, Length=219, Percent_Identity=27.8538812785388, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1786783, Length=223, Percent_Identity=29.5964125560538, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI145693157, Length=246, Percent_Identity=26.4227642276423, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI87082128, Length=322, Percent_Identity=25.1552795031056, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1788549, Length=222, Percent_Identity=25.2252252252252, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI48994928, Length=215, Percent_Identity=29.3023255813954, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1789149, Length=218, Percent_Identity=29.3577981651376, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1787374, Length=265, Percent_Identity=27.1698113207547, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI1786912, Length=237, Percent_Identity=28.2700421940928, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1790861, Length=281, Percent_Identity=25.6227758007117, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 50640; Mature: 50640
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIDRRLLQLAFGGLFWRTFLLIALLISVSLAAWFQSFRVIEREPRAQRVALQLVAIVKL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TRTALLYSDPDLRRALLQDLESNEGVRVYPREKTDKFKLQPDESLNRLIEHDIRSRLGDE HHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEECCCHHHHHHHHHHHHHHHCCCH TVIAQSVNDIPGVWISFKIDDDDYWVALDRDQLDSVTGLQWAGWGLFALALSLFGSAFIT HHHHHHHCCCCCEEEEEEECCCCEEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH SLVNRPFSRLALAARQIGSGQTPELLPERGMGVAAETNRSFNQMVRDLEQLEADRALMLA HHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCHHHHHH GISHDLRTPLARLRLETEMSPSDQATKDAMVDDIEQMDRIIAAFIDYARPSQRKPEPVDL CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH SSIAHEVAARVSGEDGVEIRTRLAPSAVIEADETDMRRVIGNLVENARKYGQSRQDGVSR HHHHHHHHHHCCCCCCCEEHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHCCHHE ITLETRVTHARVELSVTDEGPGIPEDQLPLVMRPFYRVDTARTKADGTGLGMAIVLRLVG EEEEEEEEEEEEEEEEECCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHH RYRGALRLRNRSPDAGLEVTLEFPGAGKARATA HHHHHEEECCCCCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MRIDRRLLQLAFGGLFWRTFLLIALLISVSLAAWFQSFRVIEREPRAQRVALQLVAIVKL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TRTALLYSDPDLRRALLQDLESNEGVRVYPREKTDKFKLQPDESLNRLIEHDIRSRLGDE HHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEECCCHHHHHHHHHHHHHHHCCCH TVIAQSVNDIPGVWISFKIDDDDYWVALDRDQLDSVTGLQWAGWGLFALALSLFGSAFIT HHHHHHHCCCCCEEEEEEECCCCEEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH SLVNRPFSRLALAARQIGSGQTPELLPERGMGVAAETNRSFNQMVRDLEQLEADRALMLA HHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCHHHHHH GISHDLRTPLARLRLETEMSPSDQATKDAMVDDIEQMDRIIAAFIDYARPSQRKPEPVDL CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH SSIAHEVAARVSGEDGVEIRTRLAPSAVIEADETDMRRVIGNLVENARKYGQSRQDGVSR HHHHHHHHHHCCCCCCCEEHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHCCHHE ITLETRVTHARVELSVTDEGPGIPEDQLPLVMRPFYRVDTARTKADGTGLGMAIVLRLVG EEEEEEEEEEEEEEEEECCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHH RYRGALRLRNRSPDAGLEVTLEFPGAGKARATA HHHHHEEECCCCCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 6292200; 2997120; 9278503; 8132603; 2277041; 2824492; 1323560; 9817206; 10426948 [H]