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The map label for this gene is omp32 [H]

Identifier: 115351968

GI number: 115351968

Start: 2112370

End: 2113413

Strand: Direct

Name: omp32 [H]

Synonym: Bamb_1917

Alternate gene names: 115351968

Gene position: 2112370-2113413 (Clockwise)

Preceding gene: 115351965

Following gene: 115351969

Centisome position: 59.39

GC content: 68.97

Gene sequence:

>1044_bases
ATGACACTCCGCTTCATCCGCACGGCCCCGGCCGCCGCGGCGCTCGCCGCATGCAGCGTTGCCGCGCATGCGCAGTCGAC
CCTCACGCTGTACGGCGCGCTCGACGCCGGCGTGCAGTACCTGACGCATGCCGACGGACGACACGCGGCCGTGCAGTTGC
AGAACTACGGGATCCTGCCTTCGCAGATCGGGCTGAAGGGCCACGAGGATCTCGGCGGCGGCTGGCGCGCGCTGTTCAAG
CTCGAACAGGGCCTCAACCTCAACGACGGCACCGCGACCGCCCCCGGCTATGCGTTCTTCCGCGGCGCGTACGTGGGTGT
CGCGGGCCCGGCCGGCACCGTCACGCTCGGGCGGCAATTCAGCGTGCTGTTCGACAAGACGCTGCTCTACGACCCGCTGT
GGTACGCGTCGTACAGCGGCCAGGGCGTGATCGTGCCGATGACGGCGAACTTCATCGACCACTCGATCAAGTATCAGTCG
CCCACGTTCGCCGGCTTCGATGTCGAGGCCCTCGCGGCGACGGCCGGCGTCGCGGGCAATACGCGCGCCGGGCGCGTGCT
CGAACTCGGCGGCCAGTACACGAGCAACGGGTTGTCGGTCAGTGCGGTGCTGCATCAGGCGCACGGCGACGCATCCGCCG
CGGACGATGCTTCCGCGCGCCGCCGCGACCTCGGCACGCTCGCCGCACGGTATGCATTCGCGTCACTGCCGCTCACCGTC
TATGCGGGCGTCGAACGCCTGAGCGGCGATCTCGATGCGGCGCGCACGATCGTCTGGGGCGGCGCGCGCTACCTGACCGC
GAGCGGAGTCGGACTGAACGCGGGCTTCTACCACACCGATTCGCGCACGCCGGCGATCGGCCACCCGACGCTGTTCATCG
CGAGCACCACCTACGCGCTGTCGAAACGCACCGTCGCCTACGTGAACCTCGGCTATGCGCGCAATAGCGGCCAGAGCTCG
CAGACCGTCTACGAATACGACCCGACGCCGCTTGCCGGCGCATCGCAGTTCGGCGCGATGGTCGGCATGTACCACCTGTT
CTGA

Upstream 100 bases:

>100_bases
CACACCGTTCATCTGCACGACTGTTCGCCCGATTTCCCGCTGCGGACACTGCGTCGCGACAACAACACACGATGCAGGAC
GGTATGGAGAACCCGACGTG

Downstream 100 bases:

>100_bases
TTCCGTCCAGCGAGATCCCGCCATGAAAACCCTTTGCTCCGATGCCGCGCTGCCGTCCGACGGCCGCACGGCGACTTTCG
CGCGCTCGACACTCGTCGCG

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MTLRFIRTAPAAAALAACSVAAHAQSTLTLYGALDAGVQYLTHADGRHAAVQLQNYGILPSQIGLKGHEDLGGGWRALFK
LEQGLNLNDGTATAPGYAFFRGAYVGVAGPAGTVTLGRQFSVLFDKTLLYDPLWYASYSGQGVIVPMTANFIDHSIKYQS
PTFAGFDVEALAATAGVAGNTRAGRVLELGGQYTSNGLSVSAVLHQAHGDASAADDASARRRDLGTLAARYAFASLPLTV
YAGVERLSGDLDAARTIVWGGARYLTASGVGLNAGFYHTDSRTPAIGHPTLFIASTTYALSKRTVAYVNLGYARNSGQSS
QTVYEYDPTPLAGASQFGAMVGMYHLF

Sequences:

>Translated_347_residues
MTLRFIRTAPAAAALAACSVAAHAQSTLTLYGALDAGVQYLTHADGRHAAVQLQNYGILPSQIGLKGHEDLGGGWRALFK
LEQGLNLNDGTATAPGYAFFRGAYVGVAGPAGTVTLGRQFSVLFDKTLLYDPLWYASYSGQGVIVPMTANFIDHSIKYQS
PTFAGFDVEALAATAGVAGNTRAGRVLELGGQYTSNGLSVSAVLHQAHGDASAADDASARRRDLGTLAARYAFASLPLTV
YAGVERLSGDLDAARTIVWGGARYLTASGVGLNAGFYHTDSRTPAIGHPTLFIASTTYALSKRTVAYVNLGYARNSGQSS
QTVYEYDPTPLAGASQFGAMVGMYHLF
>Mature_346_residues
TLRFIRTAPAAAALAACSVAAHAQSTLTLYGALDAGVQYLTHADGRHAAVQLQNYGILPSQIGLKGHEDLGGGWRALFKL
EQGLNLNDGTATAPGYAFFRGAYVGVAGPAGTVTLGRQFSVLFDKTLLYDPLWYASYSGQGVIVPMTANFIDHSIKYQSP
TFAGFDVEALAATAGVAGNTRAGRVLELGGQYTSNGLSVSAVLHQAHGDASAADDASARRRDLGTLAARYAFASLPLTVY
AGVERLSGDLDAARTIVWGGARYLTASGVGLNAGFYHTDSRTPAIGHPTLFIASTTYALSKRTVAYVNLGYARNSGQSSQ
TVYEYDPTPLAGASQFGAMVGMYHLF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 36393; Mature: 36262

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRFIRTAPAAAALAACSVAAHAQSTLTLYGALDAGVQYLTHADGRHAAVQLQNYGILP
CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHCCCCCEEEEEEECCCCCH
SQIGLKGHEDLGGGWRALFKLEQGLNLNDGTATAPGYAFFRGAYVGVAGPAGTVTLGRQF
HHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCEEEECCCCCCEEEECCEE
SVLFDKTLLYDPLWYASYSGQGVIVPMTANFIDHSIKYQSPTFAGFDVEALAATAGVAGN
EEEEHHHHHCCCCEEECCCCCEEEEEEEHHHHCCCEEECCCCCCCCCHHHHHHHCCCCCC
TRAGRVLELGGQYTSNGLSVSAVLHQAHGDASAADDASARRRDLGTLAARYAFASLPLTV
CCCCEEEEECCCCCCCCEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE
YAGVERLSGDLDAARTIVWGGARYLTASGVGLNAGFYHTDSRTPAIGHPTLFIASTTYAL
EHHHHHHCCCHHHHHEEEECCEEEEEECCCCCCCCEEECCCCCCCCCCCEEEEEEEEEHH
SKRTVAYVNLGYARNSGQSSQTVYEYDPTPLAGASQFGAMVGMYHLF
CCCEEEEEEECEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TLRFIRTAPAAAALAACSVAAHAQSTLTLYGALDAGVQYLTHADGRHAAVQLQNYGILP
EEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHCCCCCEEEEEEECCCCCH
SQIGLKGHEDLGGGWRALFKLEQGLNLNDGTATAPGYAFFRGAYVGVAGPAGTVTLGRQF
HHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCEEEECCCCCCEEEECCEE
SVLFDKTLLYDPLWYASYSGQGVIVPMTANFIDHSIKYQSPTFAGFDVEALAATAGVAGN
EEEEHHHHHCCCCEEECCCCCEEEEEEEHHHHCCCEEECCCCCCCCCHHHHHHHCCCCCC
TRAGRVLELGGQYTSNGLSVSAVLHQAHGDASAADDASARRRDLGTLAARYAFASLPLTV
CCCCEEEEECCCCCCCCEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE
YAGVERLSGDLDAARTIVWGGARYLTASGVGLNAGFYHTDSRTPAIGHPTLFIASTTYAL
EHHHHHHCCCHHHHHEEEECCEEEEEECCCCCCCCEEECCCCCCCCCCCEEEEEEEEEHH
SKRTVAYVNLGYARNSGQSSQTVYEYDPTPLAGASQFGAMVGMYHLF
CCCEEEEEEECEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]