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The map label for this gene is dadA [H]

Identifier: 115351954

GI number: 115351954

Start: 2092484

End: 2093788

Strand: Direct

Name: dadA [H]

Synonym: Bamb_1903

Alternate gene names: 115351954

Gene position: 2092484-2093788 (Clockwise)

Preceding gene: 115351951

Following gene: 115351955

Centisome position: 58.83

GC content: 73.1

Gene sequence:

>1305_bases
ATGGATGTCATCGTCATCGGCGGCGGACTCAGCGGCGTCGCCACCGCCTACCAATTGCGTGCGGCCGGCCATCGCGTGTG
CGTGGTCGAGCGCCACGCGACCGTCGCGCAGGGTGCGACCTACGGCGACGGCGGCGCACTGCTGCCGAGCCCGCTCGACG
TCTGGTTCGGCCCCACCTTCATGCACCAGCGCCAGCCGCGCGACACCGGCATCGTGTACAAGCCGGGCTTGAACGGCGGC
GTGCGCCGCTTCGTCAAGCAGCTCGCGGCGCTGCGCGAGCCCGACGCATTCGTCGCGCAGTACGCACGGCTGCGCCCGCT
GATCGACGCGTCGCGCGAGTCGCTCGCCGACATCGAGGCGCGCTTCCAGCTCGAATTCGAGCAGAAACCGGGGATCCTCC
ACGTCGTGCGCGACACGCGCGACTGGGACGCGCTGCAGCCGGCGCTCGACCTGCTGCGCACGCTCGACCAGCCGTACCGG
GTGCTCACCGCCGACGAATGCGCGGCACTCGAGCCGTCGGTGCCGGCCGAGCCCGGCTTCGCCGGCGGCGTGCTGCTCGA
GGCCGAGCGCACCGGCAACTGCCCGCTGTTCGCGAAGCTGGTCAAGCAGACGCTCGACGAGCACGGCGTGCAGTTTCGCT
TCGGCGCGGACGTCGCCGCGATCCGCGTCGACACCGGCCGCGCCGCGGTCGAGCTCGCGCCGCCGGCCGGCGGGCGGCAT
GCGACGAAGGCACACGAGGTCGACGTGATTTCGGCCGACGCGATCGTGGTCGCCGCCGGCGCCGGCAGCCTGCCGCTGCT
GGAGCGGCTCGGCTGGCGGCTGCCGCTGCATCCGGTGCGCGCCCACACGCTGACCGCGCCGGTCGCGTACGAAGAACATG
CGCCGCACCTGAGCGTCGTCGATTCGATCAAGCGGATCTCGATCACGCGCACCCACCAGCGGTTGCGCGTCGGCGGCGGC
GGCGTGCTGCAGAGCCTCGCCGACACCGCGAAGCCGCTTCCCGAGCCGTTGTCCGAGGCCGCGCTCGCGCTGCTCGGGCA
GGCCGTCCACGACTGGGTGCCCGGCGCCGCAAAGATTTCCGCCGCGCTGTCGTGGCAAGGCACGCAGCTGCTGTCGCCGG
ACGGCCTGCCGGTCGTCGGTCCGACCCCGCATCCGCGCGTGTTCGTCAATTTCGGCCACGGCCCGGCCGGCTGGGGCCTC
GCGTGCGGGTCTGCTAAAGTGGTGACCGACTGCGTGGGCGGCGCCGCGCAGCAGTGGCCGGCCGACACGCTCGCCGCGCT
GAGCGCCGCGCGCTTCACGACCTGA

Upstream 100 bases:

>100_bases
CGCGCGCTTTTGGCGCTATCATTCCCGGTTCACCGGGCCGGGGGCCCGTCAGCGAATTCTCACCGGGCGGCGTGCGCGCC
GCCCGTCATCGAAGCAATCC

Downstream 100 bases:

>100_bases
CCGCCGCGGGCTCGCCCCCGGGGCGGCTTCCTCTTCGCCGCCATGACTCCGCGATGACGAACACCCGCCCGCTTCCCGAC
TCCGCCCCGCTCGCGCTGCT

Product: D-amino-acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MDVIVIGGGLSGVATAYQLRAAGHRVCVVERHATVAQGATYGDGGALLPSPLDVWFGPTFMHQRQPRDTGIVYKPGLNGG
VRRFVKQLAALREPDAFVAQYARLRPLIDASRESLADIEARFQLEFEQKPGILHVVRDTRDWDALQPALDLLRTLDQPYR
VLTADECAALEPSVPAEPGFAGGVLLEAERTGNCPLFAKLVKQTLDEHGVQFRFGADVAAIRVDTGRAAVELAPPAGGRH
ATKAHEVDVISADAIVVAAGAGSLPLLERLGWRLPLHPVRAHTLTAPVAYEEHAPHLSVVDSIKRISITRTHQRLRVGGG
GVLQSLADTAKPLPEPLSEAALALLGQAVHDWVPGAAKISAALSWQGTQLLSPDGLPVVGPTPHPRVFVNFGHGPAGWGL
ACGSAKVVTDCVGGAAQQWPADTLAALSAARFTT

Sequences:

>Translated_434_residues
MDVIVIGGGLSGVATAYQLRAAGHRVCVVERHATVAQGATYGDGGALLPSPLDVWFGPTFMHQRQPRDTGIVYKPGLNGG
VRRFVKQLAALREPDAFVAQYARLRPLIDASRESLADIEARFQLEFEQKPGILHVVRDTRDWDALQPALDLLRTLDQPYR
VLTADECAALEPSVPAEPGFAGGVLLEAERTGNCPLFAKLVKQTLDEHGVQFRFGADVAAIRVDTGRAAVELAPPAGGRH
ATKAHEVDVISADAIVVAAGAGSLPLLERLGWRLPLHPVRAHTLTAPVAYEEHAPHLSVVDSIKRISITRTHQRLRVGGG
GVLQSLADTAKPLPEPLSEAALALLGQAVHDWVPGAAKISAALSWQGTQLLSPDGLPVVGPTPHPRVFVNFGHGPAGWGL
ACGSAKVVTDCVGGAAQQWPADTLAALSAARFTT
>Mature_434_residues
MDVIVIGGGLSGVATAYQLRAAGHRVCVVERHATVAQGATYGDGGALLPSPLDVWFGPTFMHQRQPRDTGIVYKPGLNGG
VRRFVKQLAALREPDAFVAQYARLRPLIDASRESLADIEARFQLEFEQKPGILHVVRDTRDWDALQPALDLLRTLDQPYR
VLTADECAALEPSVPAEPGFAGGVLLEAERTGNCPLFAKLVKQTLDEHGVQFRFGADVAAIRVDTGRAAVELAPPAGGRH
ATKAHEVDVISADAIVVAAGAGSLPLLERLGWRLPLHPVRAHTLTAPVAYEEHAPHLSVVDSIKRISITRTHQRLRVGGG
GVLQSLADTAKPLPEPLSEAALALLGQAVHDWVPGAAKISAALSWQGTQLLSPDGLPVVGPTPHPRVFVNFGHGPAGWGL
ACGSAKVVTDCVGGAAQQWPADTLAALSAARFTT

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=446, Percent_Identity=27.8026905829596, Blast_Score=175, Evalue=5e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 45934; Mature: 45934

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVIVIGGGLSGVATAYQLRAAGHRVCVVERHATVAQGATYGDGGALLPSPLDVWFGPTF
CEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCHHHCCCEECCCCCCCCCCCHHHCCCHH
MHQRQPRDTGIVYKPGLNGGVRRFVKQLAALREPDAFVAQYARLRPLIDASRESLADIEA
HHCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEE
RFQLEFEQKPGILHVVRDTRDWDALQPALDLLRTLDQPYRVLTADECAALEPSVPAEPGF
EEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCHHCCCCCCCCCCCCC
AGGVLLEAERTGNCPLFAKLVKQTLDEHGVQFRFGADVAAIRVDTGRAAVELAPPAGGRH
CCCEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECCCEEEEEEECCCEEEEECCCCCCCC
ATKAHEVDVISADAIVVAAGAGSLPLLERLGWRLPLHPVRAHTLTAPVAYEEHAPHLSVV
CCCCCCEEEEECCEEEEEECCCCCHHHHHCCCCCCCCCCCHHEEECCCCHHCCCCCHHHH
DSIKRISITRTHQRLRVGGGGVLQSLADTAKPLPEPLSEAALALLGQAVHDWVPGAAKIS
HHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
AALSWQGTQLLSPDGLPVVGPTPHPRVFVNFGHGPAGWGLACGSAKVVTDCVGGAAQQWP
EEEEECCCEEECCCCCEECCCCCCCEEEEECCCCCCCCCEECCCCHHHHHHHCCCHHCCC
ADTLAALSAARFTT
HHHHHHHHHHHCCC
>Mature Secondary Structure
MDVIVIGGGLSGVATAYQLRAAGHRVCVVERHATVAQGATYGDGGALLPSPLDVWFGPTF
CEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCHHHCCCEECCCCCCCCCCCHHHCCCHH
MHQRQPRDTGIVYKPGLNGGVRRFVKQLAALREPDAFVAQYARLRPLIDASRESLADIEA
HHCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEE
RFQLEFEQKPGILHVVRDTRDWDALQPALDLLRTLDQPYRVLTADECAALEPSVPAEPGF
EEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCHHCCCCCCCCCCCCC
AGGVLLEAERTGNCPLFAKLVKQTLDEHGVQFRFGADVAAIRVDTGRAAVELAPPAGGRH
CCCEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECCCEEEEEEECCCEEEEECCCCCCCC
ATKAHEVDVISADAIVVAAGAGSLPLLERLGWRLPLHPVRAHTLTAPVAYEEHAPHLSVV
CCCCCCEEEEECCEEEEEECCCCCHHHHHCCCCCCCCCCCHHEEECCCCHHCCCCCHHHH
DSIKRISITRTHQRLRVGGGGVLQSLADTAKPLPEPLSEAALALLGQAVHDWVPGAAKIS
HHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
AALSWQGTQLLSPDGLPVVGPTPHPRVFVNFGHGPAGWGLACGSAKVVTDCVGGAAQQWP
EEEEECCCEEECCCCCEECCCCCCCEEEEECCCCCCCCCEECCCCHHHHHHHCCCHHCCC
ADTLAALSAARFTT
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA