| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is bolA [C]
Identifier: 115351950
GI number: 115351950
Start: 2086183
End: 2086491
Strand: Direct
Name: bolA [C]
Synonym: Bamb_1899
Alternate gene names: 115351950
Gene position: 2086183-2086491 (Clockwise)
Preceding gene: 115351949
Following gene: 115351951
Centisome position: 58.66
GC content: 68.28
Gene sequence:
>309_bases ATGACCGACGCCTTTCTCGACGCCTCGCCCGACGAGCGCATCGCGCTGATCGAAGCGCGCCTGACCGCCTCGCTCGCCCC GCTGTCGCTCACGGTGCGCGACGACAGCGCGCAGCATGCGGGCCACGCCGGCGCGGCCGCCGGCGGCCACTACACGGTCA CGATCGTGTCGGCCGCATTCGCGGGCAAGCCACGCGTGGCGCGGCACCGGCTGGTGTATGATGCGCTCGCTGATGCGATG CAGCGCGGCATTCACGCGCTCGCGATCGTGGCTTATACGCCCGAAGAATTCAACGAATCTTCAATCTAG
Upstream 100 bases:
>100_bases CAGTGGGTGAACTTCAAGCTGTTCGGGACGACGGGCGCGATGGTCGTGTTCATCATCCTGCAGAGCCTGTGGCTCACGAA GTACCTGAAGGACGAGTGAC
Downstream 100 bases:
>100_bases TCTCAACAGGAATTCCCGATGATCCTGAAATCCCCCCGCCTGTGGGTCGCGGCGGCTGCTTTTGCAGCGGCACCGGCATT CGCCCAGAACATCGCCGTCG
Product: BolA family protein
Products: NA
Alternate protein names: BolA-Like Protein; BolA Protein; Morphogene BolA Protein; Stress-Induced Morphogene BolA- Like Protein; Transcriptional Regulator Bola; Stress-Induced Morphogen Protein
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MTDAFLDASPDERIALIEARLTASLAPLSLTVRDDSAQHAGHAGAAAGGHYTVTIVSAAFAGKPRVARHRLVYDALADAM QRGIHALAIVAYTPEEFNESSI
Sequences:
>Translated_102_residues MTDAFLDASPDERIALIEARLTASLAPLSLTVRDDSAQHAGHAGAAAGGHYTVTIVSAAFAGKPRVARHRLVYDALADAM QRGIHALAIVAYTPEEFNESSI >Mature_101_residues TDAFLDASPDERIALIEARLTASLAPLSLTVRDDSAQHAGHAGAAAGGHYTVTIVSAAFAGKPRVARHRLVYDALADAMQ RGIHALAIVAYTPEEFNESSI
Specific function: Plays An Important Role In General Stress Response (Heat Shock, Acidic Stress, Oxidative Stress, Carbon-Starvation Stress And Osmotic Shock). Involved In Morphogenetic Pathway. Has A Role Is The Induction Of The Expression Of Daca (Pbp5), Dacc (Pbp6) And
COG id: COG0271
COG function: function code T; Stress-induced morphogen (activity unknown)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081740, Length=82, Percent_Identity=37.8048780487805, Blast_Score=61, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10743; Mature: 10612
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAFLDASPDERIALIEARLTASLAPLSLTVRDDSAQHAGHAGAAAGGHYTVTIVSAAF CCCCCCCCCCCCEEEEEEEEHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECC AGKPRVARHRLVYDALADAMQRGIHALAIVAYTPEEFNESSI CCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCC >Mature Secondary Structure TDAFLDASPDERIALIEARLTASLAPLSLTVRDDSAQHAGHAGAAAGGHYTVTIVSAAF CCCCCCCCCCCEEEEEEEEHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECC AGKPRVARHRLVYDALADAMQRGIHALAIVAYTPEEFNESSI CCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA