The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351939

Identifier: 115351939

GI number: 115351939

Start: 2070856

End: 2071785

Strand: Direct

Name: 115351939

Synonym: Bamb_1888

Alternate gene names: NA

Gene position: 2070856-2071785 (Clockwise)

Preceding gene: 115351938

Following gene: 115351941

Centisome position: 58.23

GC content: 55.81

Gene sequence:

>930_bases
ATGAGCAAGATGCTGTATCGGTTTGCGTTCGTCGCGACATTTATCTGGGCCGCTTCGGTCAACGCAGCCGAGGTGCTAAG
CACCGCCACCGCCCACACAGCGCGCGACATGTGGCATCAATACATGGATACGCACGGAGACTGCGGCAGCAATACCGCTC
CCGTATTTTTATGCACCGGCATCATCATTCGCGAAACCGTACCGGGGCCAGGCTATTATTCGTGGCAACCTTCTCCTGAA
GACGTGGCAACCGGTCGCGTCTCGTTTTCCTATCTTCGTAAAGACGCAAAATTCGGCGGATTCAAGAACGGTGGCTCGAA
CGGCTTCACGCTGTTTCCGGTTCTGGGACCGTACAAAGGGCCGGCGGACAAAACGAAGCTTGAGGTACTGTGCGCTTTTC
CCATGGACGGCTGGACCGACCGCCGATCGACGGACCATGGGTGCGGACCGACGCAAACGTTCCCTGCGCAGAGCGTCCTT
TGTCAGCAGCAAGGGATCGTTACCGCTGAAGCATGGTTGAACCATTGGAACGCGGCGCCTGCTGGAAGTAATAGAAACCT
TTATCAATGCGGTTTCGATGTGCGGCACGGTTCACCCTTTGGTGATACAACCGGTGCATTTAACCAGTTGATCAGGGCAA
TGCAACTACTGGGCGAGACCGAGTTCCACGACCACAATGAGCTCGTGATCGACGCGTGGCCGGCAAACCTCAATCCCGCA
GAGCTACCGATTCAATCGTTCTTCTATGTGGCGAGCGGTTCGGAGGCCGGTGGCCAAGCGCTCGCGAATGCGCAAAAGGA
TCAGAAGGATTATTACGACGTCACCAACGGCGACTTCGTCCCGATCGTCCGTATCACTCCACCGCAGTCGATGAGTGACG
ACTACGATTTTCATTTCAGACCGGAAGATCAAGCCGTTCCGATTCCGTAA

Upstream 100 bases:

>100_bases
CCATTTTAGTGATTGGGAATAACGTCCGTTCATCCATTAAATGCCGGCGTATGGATACGACAAACATAAAGAGCCGGTGC
TTGGTCGGTGGAGGAGATAG

Downstream 100 bases:

>100_bases
GTCGGCTCACGGGCAGGTAAGGTAACCACACGTGGGGGCCCGCCCGCCGCAGCGCGATTCGAAACAGGCACGTGGCGCGG
GTTCTTCTCGCGCTGCGGCT

Product: HvnB; halovibrin

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MSKMLYRFAFVATFIWAASVNAAEVLSTATAHTARDMWHQYMDTHGDCGSNTAPVFLCTGIIIRETVPGPGYYSWQPSPE
DVATGRVSFSYLRKDAKFGGFKNGGSNGFTLFPVLGPYKGPADKTKLEVLCAFPMDGWTDRRSTDHGCGPTQTFPAQSVL
CQQQGIVTAEAWLNHWNAAPAGSNRNLYQCGFDVRHGSPFGDTTGAFNQLIRAMQLLGETEFHDHNELVIDAWPANLNPA
ELPIQSFFYVASGSEAGGQALANAQKDQKDYYDVTNGDFVPIVRITPPQSMSDDYDFHFRPEDQAVPIP

Sequences:

>Translated_309_residues
MSKMLYRFAFVATFIWAASVNAAEVLSTATAHTARDMWHQYMDTHGDCGSNTAPVFLCTGIIIRETVPGPGYYSWQPSPE
DVATGRVSFSYLRKDAKFGGFKNGGSNGFTLFPVLGPYKGPADKTKLEVLCAFPMDGWTDRRSTDHGCGPTQTFPAQSVL
CQQQGIVTAEAWLNHWNAAPAGSNRNLYQCGFDVRHGSPFGDTTGAFNQLIRAMQLLGETEFHDHNELVIDAWPANLNPA
ELPIQSFFYVASGSEAGGQALANAQKDQKDYYDVTNGDFVPIVRITPPQSMSDDYDFHFRPEDQAVPIP
>Mature_308_residues
SKMLYRFAFVATFIWAASVNAAEVLSTATAHTARDMWHQYMDTHGDCGSNTAPVFLCTGIIIRETVPGPGYYSWQPSPED
VATGRVSFSYLRKDAKFGGFKNGGSNGFTLFPVLGPYKGPADKTKLEVLCAFPMDGWTDRRSTDHGCGPTQTFPAQSVLC
QQQGIVTAEAWLNHWNAAPAGSNRNLYQCGFDVRHGSPFGDTTGAFNQLIRAMQLLGETEFHDHNELVIDAWPANLNPAE
LPIQSFFYVASGSEAGGQALANAQKDQKDYYDVTNGDFVPIVRITPPQSMSDDYDFHFRPEDQAVPIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33981; Mature: 33850

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKMLYRFAFVATFIWAASVNAAEVLSTATAHTARDMWHQYMDTHGDCGSNTAPVFLCTG
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC
IIIRETVPGPGYYSWQPSPEDVATGRVSFSYLRKDAKFGGFKNGGSNGFTLFPVLGPYKG
EEEEECCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC
PADKTKLEVLCAFPMDGWTDRRSTDHGCGPTQTFPAQSVLCQQQGIVTAEAWLNHWNAAP
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEHHHHHHHCCCCC
AGSNRNLYQCGFDVRHGSPFGDTTGAFNQLIRAMQLLGETEFHDHNELVIDAWPANLNPA
CCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHH
ELPIQSFFYVASGSEAGGQALANAQKDQKDYYDVTNGDFVPIVRITPPQSMSDDYDFHFR
HCCHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEC
PEDQAVPIP
CCCCCCCCC
>Mature Secondary Structure 
SKMLYRFAFVATFIWAASVNAAEVLSTATAHTARDMWHQYMDTHGDCGSNTAPVFLCTG
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC
IIIRETVPGPGYYSWQPSPEDVATGRVSFSYLRKDAKFGGFKNGGSNGFTLFPVLGPYKG
EEEEECCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC
PADKTKLEVLCAFPMDGWTDRRSTDHGCGPTQTFPAQSVLCQQQGIVTAEAWLNHWNAAP
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEHHHHHHHCCCCC
AGSNRNLYQCGFDVRHGSPFGDTTGAFNQLIRAMQLLGETEFHDHNELVIDAWPANLNPA
CCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHH
ELPIQSFFYVASGSEAGGQALANAQKDQKDYYDVTNGDFVPIVRITPPQSMSDDYDFHFR
HCCHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEC
PEDQAVPIP
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA