The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351845

Identifier: 115351845

GI number: 115351845

Start: 1982850

End: 1983365

Strand: Direct

Name: 115351845

Synonym: Bamb_1794

Alternate gene names: NA

Gene position: 1982850-1983365 (Clockwise)

Preceding gene: 115351838

Following gene: 115351846

Centisome position: 55.75

GC content: 67.25

Gene sequence:

>516_bases
TTGGCCGACTTTCGCAATGCACCATGGCCGCTGCGGGCCCGCGCCGTCAGGCGTCCCGTATGCGCCGGCTCGCGAAATCG
GCCGCCCGGGCCCGTGCGGCCCGTGCCAGACACTCCCCTACGGAAACCGCGGATTAACGATTTGAAACTGCACCAGGACA
CGAGCGGCGCGCTCAACACCGTCACCGGCTACGGCCCCGATTATGTCGACGTCAACCTCCAACGCCACGAAGGGAGCGTC
ATCGTACTGCCCGGCGCACCGGTGCGGGAATGGCCGGTGTCGTCGTTCGACGCACTCGCGCCCGAGCATTTCGCGATGCT
GCTCGACCCGGCGCCCGAACTCGTGATCTTCGGCAGCGGCGCACGGCTGCGCTTCCCGCACCCGCGGCTCGTGGCCGCGC
TCACGGCCAAGCGAATCGGCGTCGAGACGATGGATTTCCAGGCCGCCTGCCGCACCTACAACATCCTGATGGCCGAGGGC
CGCAAAGTCGCCGCCGCGCTCTTAATTGAACGTTAA

Upstream 100 bases:

>100_bases
TGTCTAGACTGGGAAAAAGCGGGCGGTCGGACGGCGCTTGTGACGACGCACGACGCAAGTGGCGCCCGGGGGCGACCAAA
AAGTTATAATTTAGCGGATT

Downstream 100 bases:

>100_bases
TCCCCGATGCGGTAAAACACGGGCCGGCGCACCGGGTCGATCCCCGGATCATCACCGGATCGATACCCGGCAGGCCGCCC
GCCGCCGGCGTAACCCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MADFRNAPWPLRARAVRRPVCAGSRNRPPGPVRPVPDTPLRKPRINDLKLHQDTSGALNTVTGYGPDYVDVNLQRHEGSV
IVLPGAPVREWPVSSFDALAPEHFAMLLDPAPELVIFGSGARLRFPHPRLVAALTAKRIGVETMDFQAACRTYNILMAEG
RKVAAALLIER

Sequences:

>Translated_171_residues
MADFRNAPWPLRARAVRRPVCAGSRNRPPGPVRPVPDTPLRKPRINDLKLHQDTSGALNTVTGYGPDYVDVNLQRHEGSV
IVLPGAPVREWPVSSFDALAPEHFAMLLDPAPELVIFGSGARLRFPHPRLVAALTAKRIGVETMDFQAACRTYNILMAEG
RKVAAALLIER
>Mature_170_residues
ADFRNAPWPLRARAVRRPVCAGSRNRPPGPVRPVPDTPLRKPRINDLKLHQDTSGALNTVTGYGPDYVDVNLQRHEGSVI
VLPGAPVREWPVSSFDALAPEHFAMLLDPAPELVIFGSGARLRFPHPRLVAALTAKRIGVETMDFQAACRTYNILMAEGR
KVAAALLIER

Specific function: Unknown

COG id: COG3737

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18817; Mature: 18686

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADFRNAPWPLRARAVRRPVCAGSRNRPPGPVRPVPDTPLRKPRINDLKLHQDTSGALNT
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEC
VTGYGPDYVDVNLQRHEGSVIVLPGAPVREWPVSSFDALAPEHFAMLLDPAPELVIFGSG
CCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCHHHCCCCCEEEEECCCCCEEEECCC
ARLRFPHPRLVAALTAKRIGVETMDFQAACRTYNILMAEGRKVAAALLIER
CEEECCCCHHHHHHHHHHCCCEECCHHHHHHEEEEEEECCCEEEEEEEECC
>Mature Secondary Structure 
ADFRNAPWPLRARAVRRPVCAGSRNRPPGPVRPVPDTPLRKPRINDLKLHQDTSGALNT
CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEC
VTGYGPDYVDVNLQRHEGSVIVLPGAPVREWPVSSFDALAPEHFAMLLDPAPELVIFGSG
CCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCHHHCCCCCEEEEECCCCCEEEECCC
ARLRFPHPRLVAALTAKRIGVETMDFQAACRTYNILMAEGRKVAAALLIER
CEEECCCCHHHHHHHHHHCCCEECCHHHHHHEEEEEEECCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA