Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351612

Identifier: 115351612

GI number: 115351612

Start: 1728107

End: 1728715

Strand: Direct

Name: 115351612

Synonym: Bamb_1559

Alternate gene names: NA

Gene position: 1728107-1728715 (Clockwise)

Preceding gene: 115351611

Following gene: 115351613

Centisome position: 48.59

GC content: 74.55

Gene sequence:

>609_bases
GTGCCGGGGACGGCACGCGCCGGCACGGCCGTGGCGTGGCCGGCGACGCTCGCCGCGAAGCGCGGCGGCCCGCTGCACGC
CGGCCATCTGCGTTTTCGCAAACAGGCCGGCGCCCCGCGCGCGCTCCATTGCTTCGTGCTCGACTGTTCGGCGTCGATGT
TGTCGCACGAACGGCTCGCGCTCGCAAAAGGGTTGATCGTCGCGTACTTCGACCAGGCCGCACGCGACCGCGTGGAAACC
GCGCTGATCTGCTTCGGCGGCAACGGCGCCGCGCGGCGTTTCGGCCCGGCCGTGCCGCGCTGGTGGAACGCGCGCTGGCT
CGAGCCGGTGGACGGCGGCGGCGGCACGCCGCTCGCGGACGGCATCGCGGCCGCCGCGCAACTGCTCGCGCGCGCGGCAC
GGCGTACGCCGGACCAGCAGCGCTGGCTGTGGGTGCTGTCCGACGGACGCACGCGCGAAACGGCACCGAAACCGGCGGCC
GCCGATCACGTCGTGTTCGTCGATTTCGATGACGCGGCCGTGCGGATCGGGCAGGGCAGGCGGCTCGCCGACGCATGGGG
CGCGCAATGGACGACGGCCGCGTCGCTGTGCCCCGGGGTGACCGGCTGA

Upstream 100 bases:

>100_bases
GCGTGGTGCCGCTGCCGCTAAAAAAACGCTGAGCCATCGAGCGGACGCCGCCGCGAACGCCGTTCGCGGTCCTCGATGGC
AGCCAGGCGCCGCCGCGCGC

Downstream 100 bases:

>100_bases
TCGGCTGATTGGCTGATTGGCTGATTGGCTGATCCGGTTGACCGGTTGACCGGTTGATCGAAACAGCGACCGCGCGGGAC
GATCGCCGGCGCTGCGCTAT

Product: Mg-chelatase subunit ChlD-like protein

Products: NA

Alternate protein names: Magnesium Chelatase Subunit ChlD; Protoporphyrin IX Magnesium Chelatase

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MPGTARAGTAVAWPATLAAKRGGPLHAGHLRFRKQAGAPRALHCFVLDCSASMLSHERLALAKGLIVAYFDQAARDRVET
ALICFGGNGAARRFGPAVPRWWNARWLEPVDGGGGTPLADGIAAAAQLLARAARRTPDQQRWLWVLSDGRTRETAPKPAA
ADHVVFVDFDDAAVRIGQGRRLADAWGAQWTTAASLCPGVTG

Sequences:

>Translated_202_residues
MPGTARAGTAVAWPATLAAKRGGPLHAGHLRFRKQAGAPRALHCFVLDCSASMLSHERLALAKGLIVAYFDQAARDRVET
ALICFGGNGAARRFGPAVPRWWNARWLEPVDGGGGTPLADGIAAAAQLLARAARRTPDQQRWLWVLSDGRTRETAPKPAA
ADHVVFVDFDDAAVRIGQGRRLADAWGAQWTTAASLCPGVTG
>Mature_201_residues
PGTARAGTAVAWPATLAAKRGGPLHAGHLRFRKQAGAPRALHCFVLDCSASMLSHERLALAKGLIVAYFDQAARDRVETA
LICFGGNGAARRFGPAVPRWWNARWLEPVDGGGGTPLADGIAAAAQLLARAARRTPDQQRWLWVLSDGRTRETAPKPAAA
DHVVFVDFDDAAVRIGQGRRLADAWGAQWTTAASLCPGVTG

Specific function: Unknown

COG id: COG1240

COG function: function code H; Mg-chelatase subunit ChlD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21439; Mature: 21307

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGTARAGTAVAWPATLAAKRGGPLHAGHLRFRKQAGAPRALHCFVLDCSASMLSHERLA
CCCCCCCCCEEECHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHH
LAKGLIVAYFDQAARDRVETALICFGGNGAARRFGPAVPRWWNARWLEPVDGGGGTPLAD
HHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHCCCCCCCCCCCEECCCCCCCCCCCHHH
GIAAAAQLLARAARRTPDQQRWLWVLSDGRTRETAPKPAAADHVVFVDFDDAAVRIGQGR
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCC
RLADAWGAQWTTAASLCPGVTG
EEHHHHCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
PGTARAGTAVAWPATLAAKRGGPLHAGHLRFRKQAGAPRALHCFVLDCSASMLSHERLA
CCCCCCCCEEECHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHH
LAKGLIVAYFDQAARDRVETALICFGGNGAARRFGPAVPRWWNARWLEPVDGGGGTPLAD
HHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHCCCCCCCCCCCEECCCCCCCCCCCHHH
GIAAAAQLLARAARRTPDQQRWLWVLSDGRTRETAPKPAAADHVVFVDFDDAAVRIGQGR
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCC
RLADAWGAQWTTAASLCPGVTG
EEHHHHCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA