| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is bchI [H]
Identifier: 115351611
GI number: 115351611
Start: 1726944
End: 1728038
Strand: Direct
Name: bchI [H]
Synonym: Bamb_1558
Alternate gene names: 115351611
Gene position: 1726944-1728038 (Clockwise)
Preceding gene: 115351610
Following gene: 115351612
Centisome position: 48.56
GC content: 71.69
Gene sequence:
>1095_bases ATGACCGATCCGACGACGCCCCGCGCACGCGCGGTGTTCCCGTTCGCGGCACTGGTCGCGCAGCAACCGTTGCAGCAGGC GCTGCTGCTCGCCGCGATCGACCCGTCGCTCGGCGGCGTGCTCGTCAGCGGGCCGCGCGGCACCGCGAAATCGACCGCCG CGCGCGCGCTGGCGGAATTGCTGCCCGAAGGCGAATTCGTCACGCTGCCGCTGTCGGCGAGCGACGAGCAGGTCACCGGC ACGCTCGATCTCGCCCATGCGCTCGCCGCCAACGGCGTGCGCTTCCGGCCGGGCCTGCTCGCCCGCGCGCATCGCGGCGT GCTGTACGTCGATGAGGTGAACCTGCTCGCCGACGGGCTCGTCGATACGCTGCTCGACGTCGCCGCGAGCGGCGTGAACG TGGTCGAGCGCGATGGCGTGTCGCACGCGCACGATGCGCGCTTCGTGTTGGTCGGCACGATGAATCCCGAGGAAGGCGAG CTGCGCCCGCAACTGCTCGACCGCTTCGGGCTGATGGTCGAGCTCGAGAACTGCTTCGACGCCGCGCAGCGCGAACGGAT CGTGAAGGCGCGCCTCGCGTTCGATCTCGATCCGGATGCGTTTCGTGCGCGTCACGCAAGCGCGCAGCGAGAACTTCGCG ACGGGATTCATGCGGCGCGGGCCCGGCTGTCGGCGCTCGATTTCGACGATGCGGTTCACGCCCGCGTGAGCGCGCTGTGC ATCGACGCGGCCGTCGACGGCCTGCGCGCCGACCTCGTGATGCTGCGCGCCGCGCGCGCGCTCGCGGCGCTGGAGCAGGC CGACGCGGTGACGGTGTCGCATGTCGAACGCGTGGCCGACGCGGTGCTGCGGCATCGGCGTCATGCGGGCGCGCCGCCGT CGTCGGGCGCGCCGCCATCGCGCGGCGACGGCGACCGCGACCGCGACCGCGACGAGCGTTCGCCACCGGACACACGCCGG CAACCCGACGATCAACCGGGCGCGGCACGCAACGATGCGACGGCATCGCAAGGCGAGTGGGGCTACTTGCCACCCGAACC GGCCGGCTTGCGCGATGTGAAAAGCGTGGTGCCGCTGCCGCTAAAAAAACGCTGA
Upstream 100 bases:
>100_bases AAGCGATGCAGCGCGGGCTGTGGCAGCAGCCGGGCGACTATCGCGAGCGGATCGAAGCGGTCTGGCTCGACAGCGAACAA CTCCAGGAAGGAGGACGGCG
Downstream 100 bases:
>100_bases GCCATCGAGCGGACGCCGCCGCGAACGCCGTTCGCGGTCCTCGATGGCAGCCAGGCGCCGCCGCGCGCGTGCCGGGGACG GCACGCGCCGGCACGGCCGT
Product: magnesium chelatase
Products: NA
Alternate protein names: Mg-protoporphyrin IX chelatase [H]
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MTDPTTPRARAVFPFAALVAQQPLQQALLLAAIDPSLGGVLVSGPRGTAKSTAARALAELLPEGEFVTLPLSASDEQVTG TLDLAHALAANGVRFRPGLLARAHRGVLYVDEVNLLADGLVDTLLDVAASGVNVVERDGVSHAHDARFVLVGTMNPEEGE LRPQLLDRFGLMVELENCFDAAQRERIVKARLAFDLDPDAFRARHASAQRELRDGIHAARARLSALDFDDAVHARVSALC IDAAVDGLRADLVMLRAARALAALEQADAVTVSHVERVADAVLRHRRHAGAPPSSGAPPSRGDGDRDRDRDERSPPDTRR QPDDQPGAARNDATASQGEWGYLPPEPAGLRDVKSVVPLPLKKR
Sequences:
>Translated_364_residues MTDPTTPRARAVFPFAALVAQQPLQQALLLAAIDPSLGGVLVSGPRGTAKSTAARALAELLPEGEFVTLPLSASDEQVTG TLDLAHALAANGVRFRPGLLARAHRGVLYVDEVNLLADGLVDTLLDVAASGVNVVERDGVSHAHDARFVLVGTMNPEEGE LRPQLLDRFGLMVELENCFDAAQRERIVKARLAFDLDPDAFRARHASAQRELRDGIHAARARLSALDFDDAVHARVSALC IDAAVDGLRADLVMLRAARALAALEQADAVTVSHVERVADAVLRHRRHAGAPPSSGAPPSRGDGDRDRDRDERSPPDTRR QPDDQPGAARNDATASQGEWGYLPPEPAGLRDVKSVVPLPLKKR >Mature_363_residues TDPTTPRARAVFPFAALVAQQPLQQALLLAAIDPSLGGVLVSGPRGTAKSTAARALAELLPEGEFVTLPLSASDEQVTGT LDLAHALAANGVRFRPGLLARAHRGVLYVDEVNLLADGLVDTLLDVAASGVNVVERDGVSHAHDARFVLVGTMNPEEGEL RPQLLDRFGLMVELENCFDAAQRERIVKARLAFDLDPDAFRARHASAQRELRDGIHAARARLSALDFDDAVHARVSALCI DAAVDGLRADLVMLRAARALAALEQADAVTVSHVERVADAVLRHRRHAGAPPSSGAPPSRGDGDRDRDRDERSPPDTRRQ PDDQPGAARNDATASQGEWGYLPPEPAGLRDVKSVVPLPLKKR
Specific function: Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX [H]
COG id: COG1239
COG function: function code H; Mg-chelatase subunit ChlI
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mg-chelatase subunits D/I family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011775 - InterPro: IPR000523 [H]
Pfam domain/function: PF01078 Mg_chelatase [H]
EC number: =6.6.1.1 [H]
Molecular weight: Translated: 38927; Mature: 38796
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPTTPRARAVFPFAALVAQQPLQQALLLAAIDPSLGGVLVSGPRGTAKSTAARALAEL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHH LPEGEFVTLPLSASDEQVTGTLDLAHALAANGVRFRPGLLARAHRGVLYVDEVNLLADGL CCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEECCCHHHHHHCCEEEEEHHHHHHHHH VDTLLDVAASGVNVVERDGVSHAHDARFVLVGTMNPEEGELRPQLLDRFGLMVELENCFD HHHHHHHHHCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCHHEEHHHHHH AAQRERIVKARLAFDLDPDAFRARHASAQRELRDGIHAARARLSALDFDDAVHARVSALC HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IDAAVDGLRADLVMLRAARALAALEQADAVTVSHVERVADAVLRHRRHAGAPPSSGAPPS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC RGDGDRDRDRDERSPPDTRRQPDDQPGAARNDATASQGEWGYLPPEPAGLRDVKSVVPLP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC LKKR CCCC >Mature Secondary Structure TDPTTPRARAVFPFAALVAQQPLQQALLLAAIDPSLGGVLVSGPRGTAKSTAARALAEL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHH LPEGEFVTLPLSASDEQVTGTLDLAHALAANGVRFRPGLLARAHRGVLYVDEVNLLADGL CCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEECCCHHHHHHCCEEEEEHHHHHHHHH VDTLLDVAASGVNVVERDGVSHAHDARFVLVGTMNPEEGELRPQLLDRFGLMVELENCFD HHHHHHHHHCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCHHEEHHHHHH AAQRERIVKARLAFDLDPDAFRARHASAQRELRDGIHAARARLSALDFDDAVHARVSALC HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IDAAVDGLRADLVMLRAARALAALEQADAVTVSHVERVADAVLRHRRHAGAPPSSGAPPS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC RGDGDRDRDRDERSPPDTRRQPDDQPGAARNDATASQGEWGYLPPEPAGLRDVKSVVPLP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC LKKR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10976061; 12093901 [H]