| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
Click here to switch to the map view.
The map label for this gene is hipO [H]
Identifier: 115351603
GI number: 115351603
Start: 1716622
End: 1717785
Strand: Direct
Name: hipO [H]
Synonym: Bamb_1550
Alternate gene names: 115351603
Gene position: 1716622-1717785 (Clockwise)
Preceding gene: 115351600
Following gene: 115351609
Centisome position: 48.27
GC content: 67.78
Gene sequence:
>1164_bases GTGACGCACAGCGTGATCCCCGCAGGCCTCGCCGACGAAATGATCGAGATCCGGCACCGCATTCATGCCCACCCCGAACT GGGCTTCGAGGAATTCGCGACGAGCGACCTCGTTGCCGAGCAGTTGCAGGCATGGGGCTACACGGTGCACCGCGGGCTGG GCGGCACGGGCGTGGTCGCGCAGCTGAAGGTCGGCAACGGCACGCAGCGCCTCGGCCTGCGCGCCGACATGGACGCGCTG CCGATCCACGAGTCGACCGGCCTGCCGTACCAGAGCACGATCCCCGGCAAGATGCACGCGTGCGGTCACGATGGCCACAC GGCGATGCTGCTCGCGGCCGCGAAGCATCTGGCGCGCGAGCGGCGCTTTTCCGGCACGCTGAACCTGATTTTCCAGCCGG CCGAGGAAGGGCTCGGCGGCGCGAAAAAGATGCTCGACGACGGGCTGTTCGAGCAGTTCCCGTGCGATGCGATCTTCGCG ATGCACAACATGCCGGGCTTCCCCACGGGCAAGTTCGGCTTCCTGGCGGGGCCGTTCATGGCGTCGTCGGATACCGTGAT CGTCGACGTGCAGGGGCGCGGCGGCCACGGCGCGGTGCCGCACAAGGCGATCGATTCGGTCGTGGTGTGCGCGCAGATCG TCATCGCGCTGCAGACGATCGTGTCGCGCAACGTGTCGCCGCTCGACATGGCGATCGTCACGGTCGGCGCGATCCACGCG GGCGACGCGCCGAACGTGATTCCCGATCGCGCCCAGATGCGCCTGTCGGTGCGCGCGCTGAAGCCCGAGGTGCGCGACCT GCTCGAGGCGCGCATCAAGGAAGTCGTTCATGCGCAGGCGGCCGTGTTCGGCGCGACCGCGACGATCGACTACCAGCGCC GCTATCCGGTGCTCGTCAACGATGCGCGGATGACCACGTTCGCACGCGACGTCGCGCGCGAGTGGGTGGGCGAAGCGAAT CTGATCGACGAGATGGTGCCGCTCACCGGCAGCGAGGATTTCGCGTTCCTGCTCGAGAAGCGGCCGGGCTGCTACCTGAT CATCGGCAACGGTGACGGCGAGGGCGGCTGCATGGTGCACAACCCCGGCTACGACTTCAACGACGCGGTACTGCCGACCG GCGCGTCGTACTGGGTCAAGCTGGCCGAGACGTTTCTGGTGTGA
Upstream 100 bases:
>100_bases AACCCCAGGTTGCCTCCACGACGACTTTCTGTCTGTCCGGTTGCTGCTCAACGGACTATCCTTGCCCGCACATTCCCCAC CAAATCCAGGAGACGACACC
Downstream 100 bases:
>100_bases CGGTGAATGCGGGGAATCGGTTCAATCGCGGCATGTTCCGAGCTAGAACACAACATCCCCGCTGAACAACGCCACCACTG CATCCGGATTCGACGGCCAG
Product: amidohydrolase
Products: NA
Alternate protein names: Benzoylglycine amidohydrolase; Hippuricase [H]
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MTHSVIPAGLADEMIEIRHRIHAHPELGFEEFATSDLVAEQLQAWGYTVHRGLGGTGVVAQLKVGNGTQRLGLRADMDAL PIHESTGLPYQSTIPGKMHACGHDGHTAMLLAAAKHLARERRFSGTLNLIFQPAEEGLGGAKKMLDDGLFEQFPCDAIFA MHNMPGFPTGKFGFLAGPFMASSDTVIVDVQGRGGHGAVPHKAIDSVVVCAQIVIALQTIVSRNVSPLDMAIVTVGAIHA GDAPNVIPDRAQMRLSVRALKPEVRDLLEARIKEVVHAQAAVFGATATIDYQRRYPVLVNDARMTTFARDVAREWVGEAN LIDEMVPLTGSEDFAFLLEKRPGCYLIIGNGDGEGGCMVHNPGYDFNDAVLPTGASYWVKLAETFLV
Sequences:
>Translated_387_residues MTHSVIPAGLADEMIEIRHRIHAHPELGFEEFATSDLVAEQLQAWGYTVHRGLGGTGVVAQLKVGNGTQRLGLRADMDAL PIHESTGLPYQSTIPGKMHACGHDGHTAMLLAAAKHLARERRFSGTLNLIFQPAEEGLGGAKKMLDDGLFEQFPCDAIFA MHNMPGFPTGKFGFLAGPFMASSDTVIVDVQGRGGHGAVPHKAIDSVVVCAQIVIALQTIVSRNVSPLDMAIVTVGAIHA GDAPNVIPDRAQMRLSVRALKPEVRDLLEARIKEVVHAQAAVFGATATIDYQRRYPVLVNDARMTTFARDVAREWVGEAN LIDEMVPLTGSEDFAFLLEKRPGCYLIIGNGDGEGGCMVHNPGYDFNDAVLPTGASYWVKLAETFLV >Mature_386_residues THSVIPAGLADEMIEIRHRIHAHPELGFEEFATSDLVAEQLQAWGYTVHRGLGGTGVVAQLKVGNGTQRLGLRADMDALP IHESTGLPYQSTIPGKMHACGHDGHTAMLLAAAKHLARERRFSGTLNLIFQPAEEGLGGAKKMLDDGLFEQFPCDAIFAM HNMPGFPTGKFGFLAGPFMASSDTVIVDVQGRGGHGAVPHKAIDSVVVCAQIVIALQTIVSRNVSPLDMAIVTVGAIHAG DAPNVIPDRAQMRLSVRALKPEVRDLLEARIKEVVHAQAAVFGATATIDYQRRYPVLVNDARMTTFARDVAREWVGEANL IDEMVPLTGSEDFAFLLEKRPGCYLIIGNGDGEGGCMVHNPGYDFNDAVLPTGASYWVKLAETFLV
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=429, Percent_Identity=26.5734265734266, Blast_Score=101, Evalue=9e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.32 [H]
Molecular weight: Translated: 41695; Mature: 41564
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHSVIPAGLADEMIEIRHRIHAHPELGFEEFATSDLVAEQLQAWGYTVHRGLGGTGVVA CCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEE QLKVGNGTQRLGLRADMDALPIHESTGLPYQSTIPGKMHACGHDGHTAMLLAAAKHLARE EEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RRFSGTLNLIFQPAEEGLGGAKKMLDDGLFEQFPCDAIFAMHNMPGFPTGKFGFLAGPFM HHCCCEEEEEEECHHHCCCHHHHHHHCCHHHHCCCHHHHHHHCCCCCCCCCCCCEECCCC ASSDTVIVDVQGRGGHGAVPHKAIDSVVVCAQIVIALQTIVSRNVSPLDMAIVTVGAIHA CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEEC GDAPNVIPDRAQMRLSVRALKPEVRDLLEARIKEVVHAQAAVFGATATIDYQRRYPVLVN CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEE DARMTTFARDVAREWVGEANLIDEMVPLTGSEDFAFLLEKRPGCYLIIGNGDGEGGCMVH CCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCCCCEEEE NPGYDFNDAVLPTGASYWVKLAETFLV CCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure THSVIPAGLADEMIEIRHRIHAHPELGFEEFATSDLVAEQLQAWGYTVHRGLGGTGVVA CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEE QLKVGNGTQRLGLRADMDALPIHESTGLPYQSTIPGKMHACGHDGHTAMLLAAAKHLARE EEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RRFSGTLNLIFQPAEEGLGGAKKMLDDGLFEQFPCDAIFAMHNMPGFPTGKFGFLAGPFM HHCCCEEEEEEECHHHCCCHHHHHHHCCHHHHCCCHHHHHHHCCCCCCCCCCCCEECCCC ASSDTVIVDVQGRGGHGAVPHKAIDSVVVCAQIVIALQTIVSRNVSPLDMAIVTVGAIHA CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEEC GDAPNVIPDRAQMRLSVRALKPEVRDLLEARIKEVVHAQAAVFGATATIDYQRRYPVLVN CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEE DARMTTFARDVAREWVGEANLIDEMVPLTGSEDFAFLLEKRPGCYLIIGNGDGEGGCMVH CCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCCCCEEEE NPGYDFNDAVLPTGASYWVKLAETFLV CCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7730270; 10688204 [H]