Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is sbp [H]

Identifier: 115351550

GI number: 115351550

Start: 1640446

End: 1641483

Strand: Direct

Name: sbp [H]

Synonym: Bamb_1497

Alternate gene names: 115351550

Gene position: 1640446-1641483 (Clockwise)

Preceding gene: 115351546

Following gene: 115351551

Centisome position: 46.12

GC content: 65.03

Gene sequence:

>1038_bases
ATGGCGAAGCGCAATACGGGGCTGGTGGGCGGAGCGGGCCGCCTGATTGCAACACTCGCGCTCGGCGCGGCGGCGGCGTT
GGGCGTCGTCACGCATGCGCAGGCCGATACGACGTTCCTGAACGTGTCGTACGACCCGACGCGCGAGCTGTATCAGGACT
TCAACCAGGCGTTCGGCAAGGCGTGGAAGGCGAAGACGGGCGAGACGGTCAACTTCAAGCAGTCGCACGGCGGCTCGGGC
GCGCAGGCGCGCTCGGTACTCGACGGCCTGCAGGCCGACGTCGTCACGCTGGCGCTCGCCTACGACATCGACGCGCTCGC
CAACAAGGGGCTGGTGAACAAGGACTGGCAAAAGCGCCTGCCGGACAACGCATCGCCGTACACGTCGACGATCGTGTTCC
TCGTGCGCAAGGGCAACCCGAAAGGGATCAAGGACTGGGACGATCTGACCAAGCCGGGCATCTCGATCGTCACGCCGAAC
CCGAAGACCTCGGGCGGTGCGCGCTGGAACTACCTGGCCGCATGGTCGTATGCCGTGCACAAGCCGGGCGGTAACGAGCA
GGGCGCGAAGGAATTCGTGACGAAGCTCTACAAGAATGCAGGCGTGCTCGATTCGGGCGCGCGTGGCGCGACGACGAGCT
TCGTGCAGCGCGGGATCGGCGACGTGCTGATCGCGTGGGAGAACGAGGCGTTCCTGTCGATCAAGGAATTCGGCACCGAC
AAGTTCGAGATCGTCGTGCCGTCGGTGAGCATCCTGGCCGAGCCGCCCGTCGCGGTGGTCGACAAGGTGGTCGACAAGAA
GGGCACGCGCAAGCTGGCGGAGGCCTACCTGAATTTCCTGTACAGCCCGCAGGGCCAGGAGATCGCGGCGCGCAACTACT
ACCGTCCGCGTTCGAAGAACGTGCCGGCGGAGCTGACGAAGCAGTTCCCGAAGCTGAAGCTGTACACGGTCGACGACACG
TTCGGCGGCTGGACGAATGCGCAGAAGACGCATTTCGCGGACGGCGGCGTGTTCGACTCGATCTACAAGCCGCAGTAA

Upstream 100 bases:

>100_bases
TTTTGAGTATTAAAAAATGAAGAACGATTATTTTTAATCATGTAACCCGTTCGCTAGACTGGCCCGACATCGCAACATCG
ACAACACTGGAGAACCAAGG

Downstream 100 bases:

>100_bases
CGCGAACAGTAACACCACGCAGCAAACCCATAACGACAGCGGTGCGCCACGATAGCGCGCCGCATCCCCGACGGCCGCCG
GCGCGATTCCCCGCGCCGGC

Product: sulfate ABC transporter periplasmic sulfate-binding protein

Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: Sulfate starvation-induced protein 2; SSI2 [H]

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MAKRNTGLVGGAGRLIATLALGAAAALGVVTHAQADTTFLNVSYDPTRELYQDFNQAFGKAWKAKTGETVNFKQSHGGSG
AQARSVLDGLQADVVTLALAYDIDALANKGLVNKDWQKRLPDNASPYTSTIVFLVRKGNPKGIKDWDDLTKPGISIVTPN
PKTSGGARWNYLAAWSYAVHKPGGNEQGAKEFVTKLYKNAGVLDSGARGATTSFVQRGIGDVLIAWENEAFLSIKEFGTD
KFEIVVPSVSILAEPPVAVVDKVVDKKGTRKLAEAYLNFLYSPQGQEIAARNYYRPRSKNVPAELTKQFPKLKLYTVDDT
FGGWTNAQKTHFADGGVFDSIYKPQ

Sequences:

>Translated_345_residues
MAKRNTGLVGGAGRLIATLALGAAAALGVVTHAQADTTFLNVSYDPTRELYQDFNQAFGKAWKAKTGETVNFKQSHGGSG
AQARSVLDGLQADVVTLALAYDIDALANKGLVNKDWQKRLPDNASPYTSTIVFLVRKGNPKGIKDWDDLTKPGISIVTPN
PKTSGGARWNYLAAWSYAVHKPGGNEQGAKEFVTKLYKNAGVLDSGARGATTSFVQRGIGDVLIAWENEAFLSIKEFGTD
KFEIVVPSVSILAEPPVAVVDKVVDKKGTRKLAEAYLNFLYSPQGQEIAARNYYRPRSKNVPAELTKQFPKLKLYTVDDT
FGGWTNAQKTHFADGGVFDSIYKPQ
>Mature_344_residues
AKRNTGLVGGAGRLIATLALGAAAALGVVTHAQADTTFLNVSYDPTRELYQDFNQAFGKAWKAKTGETVNFKQSHGGSGA
QARSVLDGLQADVVTLALAYDIDALANKGLVNKDWQKRLPDNASPYTSTIVFLVRKGNPKGIKDWDDLTKPGISIVTPNP
KTSGGARWNYLAAWSYAVHKPGGNEQGAKEFVTKLYKNAGVLDSGARGATTSFVQRGIGDVLIAWENEAFLSIKEFGTDK
FEIVVPSVSILAEPPVAVVDKVVDKKGTRKLAEAYLNFLYSPQGQEIAARNYYRPRSKNVPAELTKQFPKLKLYTVDDTF
GGWTNAQKTHFADGGVFDSIYKPQ

Specific function: This protein specifically binds sulfate and is involved in its transmembrane transport [H]

COG id: COG1613

COG function: function code P; ABC-type sulfate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]

Homologues:

Organism=Escherichia coli, GI1790351, Length=323, Percent_Identity=65.015479876161, Blast_Score=454, Evalue=1e-129,
Organism=Escherichia coli, GI1788765, Length=312, Percent_Identity=49.0384615384615, Blast_Score=300, Evalue=1e-82,

Paralogues:

None

Copy number: 1240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR000957
- InterPro:   IPR005669 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 37380; Mature: 37248

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS00757 PROK_SULFATE_BIND_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRNTGLVGGAGRLIATLALGAAAALGVVTHAQADTTFLNVSYDPTRELYQDFNQAFGK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHH
AWKAKTGETVNFKQSHGGSGAQARSVLDGLQADVVTLALAYDIDALANKGLVNKDWQKRL
HHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHC
PDNASPYTSTIVFLVRKGNPKGIKDWDDLTKPGISIVTPNPKTSGGARWNYLAAWSYAVH
CCCCCCCCEEEEEEEECCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCEEEEEEEEEEEE
KPGGNEQGAKEFVTKLYKNAGVLDSGARGATTSFVQRGIGDVLIAWENEAFLSIKEFGTD
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCEEEHHHCCCC
KFEIVVPSVSILAEPPVAVVDKVVDKKGTRKLAEAYLNFLYSPQGQEIAARNYYRPRSKN
EEEEEECCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCC
VPAELTKQFPKLKLYTVDDTFGGWTNAQKTHFADGGVFDSIYKPQ
CCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKRNTGLVGGAGRLIATLALGAAAALGVVTHAQADTTFLNVSYDPTRELYQDFNQAFGK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHH
AWKAKTGETVNFKQSHGGSGAQARSVLDGLQADVVTLALAYDIDALANKGLVNKDWQKRL
HHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHC
PDNASPYTSTIVFLVRKGNPKGIKDWDDLTKPGISIVTPNPKTSGGARWNYLAAWSYAVH
CCCCCCCCEEEEEEEECCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCEEEEEEEEEEEE
KPGGNEQGAKEFVTKLYKNAGVLDSGARGATTSFVQRGIGDVLIAWENEAFLSIKEFGTD
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCEEEHHHCCCC
KFEIVVPSVSILAEPPVAVVDKVVDKKGTRKLAEAYLNFLYSPQGQEIAARNYYRPRSKN
EEEEEECCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCC
VPAELTKQFPKLKLYTVDDTFGGWTNAQKTHFADGGVFDSIYKPQ
CCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]

Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3158524; 2002055; 8346018; 9278503; 9298646; 8774726 [H]