Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351543

Identifier: 115351543

GI number: 115351543

Start: 1635250

End: 1635672

Strand: Direct

Name: 115351543

Synonym: Bamb_1490

Alternate gene names: NA

Gene position: 1635250-1635672 (Clockwise)

Preceding gene: 115351542

Following gene: 115351546

Centisome position: 45.98

GC content: 65.01

Gene sequence:

>423_bases
ATGACCCAACCGAAGATTCATCCTCGACTCGAAAAGGCGCTGACGCGCGGCGATCTCGCGATCCGCCAGGCCAATTCCGC
GCGGGCGACTGCCGTGCTGAACGCGCTCGGCACGATGATCATCGAGGCCTCCGCCACGATCGGCGTCGAGGCCAGCATCG
AGATTCCGCAAGGCGACCGCATTTACGATCCGGTGAACGGCCTGTGGCCGCAGAAGATGCTGGTGTCGTTCGACGGCCCG
GTCGCCGAAGCCGACGCGGAAGAGCTGCGTGCGGTCTATCTGATCGCCGACGATCCGGGTACGCAATTCCGCGTCGAATG
GCATCGGGCGGACGGCAAGCTCGGTCGCCAGGAAGGCGGCCCGCTGGCGACCGTCGCATTCCTGACCGACGTCGAAATCC
CGTGGAGCGATGACGACGAGTAA

Upstream 100 bases:

>100_bases
CGCCGCGCGCTGACCGATCCCGTCGCGTGATCGTCGTATTCATCCGGCGCCGCCGCTTCGCACGTGCGGTGCCCTTTACA
AGAAGCAAACAGGAAAACGC

Downstream 100 bases:

>100_bases
CGTCGTCTGACGGCGTCTCAATGTCGTCGCATCGGGCCGGCGCCGGATGCGCCGGTCAGCGCATCATCCGCCGCCGGAAC
AGCCACGCGCAGACCAGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTQPKIHPRLEKALTRGDLAIRQANSARATAVLNALGTMIIEASATIGVEASIEIPQGDRIYDPVNGLWPQKMLVSFDGP
VAEADAEELRAVYLIADDPGTQFRVEWHRADGKLGRQEGGPLATVAFLTDVEIPWSDDDE

Sequences:

>Translated_140_residues
MTQPKIHPRLEKALTRGDLAIRQANSARATAVLNALGTMIIEASATIGVEASIEIPQGDRIYDPVNGLWPQKMLVSFDGP
VAEADAEELRAVYLIADDPGTQFRVEWHRADGKLGRQEGGPLATVAFLTDVEIPWSDDDE
>Mature_139_residues
TQPKIHPRLEKALTRGDLAIRQANSARATAVLNALGTMIIEASATIGVEASIEIPQGDRIYDPVNGLWPQKMLVSFDGPV
AEADAEELRAVYLIADDPGTQFRVEWHRADGKLGRQEGGPLATVAFLTDVEIPWSDDDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15250; Mature: 15119

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPKIHPRLEKALTRGDLAIRQANSARATAVLNALGTMIIEASATIGVEASIEIPQGDR
CCCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCCC
IYDPVNGLWPQKMLVSFDGPVAEADAEELRAVYLIADDPGTQFRVEWHRADGKLGRQEGG
EECCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCC
PLATVAFLTDVEIPWSDDDE
CEEEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
TQPKIHPRLEKALTRGDLAIRQANSARATAVLNALGTMIIEASATIGVEASIEIPQGDR
CCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCCC
IYDPVNGLWPQKMLVSFDGPVAEADAEELRAVYLIADDPGTQFRVEWHRADGKLGRQEGG
EECCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCC
PLATVAFLTDVEIPWSDDDE
CEEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA