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The map label for this gene is yraQ [H]

Identifier: 115351542

GI number: 115351542

Start: 1634014

End: 1635072

Strand: Direct

Name: yraQ [H]

Synonym: Bamb_1489

Alternate gene names: 115351542

Gene position: 1634014-1635072 (Clockwise)

Preceding gene: 115351541

Following gene: 115351543

Centisome position: 45.94

GC content: 69.31

Gene sequence:

>1059_bases
ATGACGACCACACGCACCCAACCCAATCCGGCGCTCGGCTGGATGACCTTCCTGCTGATCGCAGTCGCGGGACTGTTCTA
CGTGAAATGGTTCCCGTACTACAACAAGGCATTCGTTGCCGCCGAGCATCATTCGATCGGCCAGTCGATCCTGATGGGCA
CGTCGGCGACCGCGCCCGAGCCGTCGCTGAAGGCGGCGCTCGACTACGCATGGGCATACGGCAAGGCGATCTGGCAGGCG
ATGGTGCTCGGCCTGCTGCTCGGTTCGGCCGTGCAGGCGCTGCTGCCCGCGCACTGGGTCGCACGCGTGCTCGGTCGCAC
GGGCTTCGGCAGTGTCGCCGCGGGCGGCCTGCTGTCGTTGCCCGGCATGATGTGCACGTGCTGCGCGGCGCCGGTCGTCG
CCGGCCTGCGCGCGCGGCACGCGTCGCCGGGCGGCGCGGTCGCGTTCTGGCTCGGCAACACGGTGCTGAATCCGGCCGCG
CTGGTGTTCATGGGCTTCGTGCTCGGCTGGCACTGGAGCGTGCTGCGGCTCGTGCTCGGCATTGCGATGGTGTTCGGGAT
CGGCTATCTGCTGAACCGCATCGCGCGTCCCGAGGACCGCGGCATCGACGACGCGCACCTCGCCGCGCTGGCGGCCGGGC
AGGCCGCGGCCGGCAATCCGTTCGTCCGCTGGATCAAGTTGCTCGTGCGCATGGCCGTGCGGCTCGTGCCCGAATACATC
GTGCTCGTGCTGCTGCTCGGCGCGGCGCGCGCATGGCTGTTCCCGCATATCGGCCCGGACATCGGCAACCATCTCGGCTG
GATCATCGCGTTCGCGGTCGCGGGCACGTTGTTCGTGATCCCGACGGCCGGCGAGGTGCCGATCATCCAGGCGATGCTGT
CGCTCGGCATGGGCGTCGGCCCGGCCGCCGCGCTGCTGATGACGCTGCCGCCGATCAGCGTGCCGTCGCTCGCGATGCTC
GCGCGTTCGTTCAAGCCGTACATGCTGGCGATCGTCACGGCCCTCGTGGTCGTGTTCGGGATCGCGAGCGGGCTGCTCGC
GATCGCGTTCGGGTTCTGA

Upstream 100 bases:

>100_bases
CGCTGCTCGACGCGCTCGCGCGCGCCGGGCTTCCGGCGTCGCCCGTCGCCGGCAACGCAGCAGGATCCGACACCGACACA
AACCAATCGACCACCACACG

Downstream 100 bases:

>100_bases
CGAACGCGCACGGGACGGCCAGCCGGCGCGAACAAGCGCCGGGGCAGCCGGCGACCGGCCCTGCGGGATGGCCGCCGCGC
CGCGCGCTGACCGATCCCGT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MTTTRTQPNPALGWMTFLLIAVAGLFYVKWFPYYNKAFVAAEHHSIGQSILMGTSATAPEPSLKAALDYAWAYGKAIWQA
MVLGLLLGSAVQALLPAHWVARVLGRTGFGSVAAGGLLSLPGMMCTCCAAPVVAGLRARHASPGGAVAFWLGNTVLNPAA
LVFMGFVLGWHWSVLRLVLGIAMVFGIGYLLNRIARPEDRGIDDAHLAALAAGQAAAGNPFVRWIKLLVRMAVRLVPEYI
VLVLLLGAARAWLFPHIGPDIGNHLGWIIAFAVAGTLFVIPTAGEVPIIQAMLSLGMGVGPAAALLMTLPPISVPSLAML
ARSFKPYMLAIVTALVVVFGIASGLLAIAFGF

Sequences:

>Translated_352_residues
MTTTRTQPNPALGWMTFLLIAVAGLFYVKWFPYYNKAFVAAEHHSIGQSILMGTSATAPEPSLKAALDYAWAYGKAIWQA
MVLGLLLGSAVQALLPAHWVARVLGRTGFGSVAAGGLLSLPGMMCTCCAAPVVAGLRARHASPGGAVAFWLGNTVLNPAA
LVFMGFVLGWHWSVLRLVLGIAMVFGIGYLLNRIARPEDRGIDDAHLAALAAGQAAAGNPFVRWIKLLVRMAVRLVPEYI
VLVLLLGAARAWLFPHIGPDIGNHLGWIIAFAVAGTLFVIPTAGEVPIIQAMLSLGMGVGPAAALLMTLPPISVPSLAML
ARSFKPYMLAIVTALVVVFGIASGLLAIAFGF
>Mature_351_residues
TTTRTQPNPALGWMTFLLIAVAGLFYVKWFPYYNKAFVAAEHHSIGQSILMGTSATAPEPSLKAALDYAWAYGKAIWQAM
VLGLLLGSAVQALLPAHWVARVLGRTGFGSVAAGGLLSLPGMMCTCCAAPVVAGLRARHASPGGAVAFWLGNTVLNPAAL
VFMGFVLGWHWSVLRLVLGIAMVFGIGYLLNRIARPEDRGIDDAHLAALAAGQAAAGNPFVRWIKLLVRMAVRLVPEYIV
LVLLLGAARAWLFPHIGPDIGNHLGWIIAFAVAGTLFVIPTAGEVPIIQAMLSLGMGVGPAAALLMTLPPISVPSLAMLA
RSFKPYMLAIVTALVVVFGIASGLLAIAFGF

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

Organism=Escherichia coli, GI1789541, Length=344, Percent_Identity=51.1627906976744, Blast_Score=308, Evalue=4e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 37073; Mature: 36942

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS01047 HMA_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTRTQPNPALGWMTFLLIAVAGLFYVKWFPYYNKAFVAAEHHSIGQSILMGTSATAPE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHCCCCCCCC
PSLKAALDYAWAYGKAIWQAMVLGLLLGSAVQALLPAHWVARVLGRTGFGSVAAGGLLSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHH
PGMMCTCCAAPVVAGLRARHASPGGAVAFWLGNTVLNPAALVFMGFVLGWHWSVLRLVLG
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAMVFGIGYLLNRIARPEDRGIDDAHLAALAAGQAAAGNPFVRWIKLLVRMAVRLVPEYI
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VLVLLLGAARAWLFPHIGPDIGNHLGWIIAFAVAGTLFVIPTAGEVPIIQAMLSLGMGVG
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCC
PAAALLMTLPPISVPSLAMLARSFKPYMLAIVTALVVVFGIASGLLAIAFGF
HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTTRTQPNPALGWMTFLLIAVAGLFYVKWFPYYNKAFVAAEHHSIGQSILMGTSATAPE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHCCCCCCCC
PSLKAALDYAWAYGKAIWQAMVLGLLLGSAVQALLPAHWVARVLGRTGFGSVAAGGLLSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHH
PGMMCTCCAAPVVAGLRARHASPGGAVAFWLGNTVLNPAALVFMGFVLGWHWSVLRLVLG
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAMVFGIGYLLNRIARPEDRGIDDAHLAALAAGQAAAGNPFVRWIKLLVRMAVRLVPEYI
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VLVLLLGAARAWLFPHIGPDIGNHLGWIIAFAVAGTLFVIPTAGEVPIIQAMLSLGMGVG
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCC
PAAALLMTLPPISVPSLAMLARSFKPYMLAIVTALVVVFGIASGLLAIAFGF
HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]