Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is tas [H]

Identifier: 115351537

GI number: 115351537

Start: 1627830

End: 1628882

Strand: Direct

Name: tas [H]

Synonym: Bamb_1484

Alternate gene names: 115351537

Gene position: 1627830-1628882 (Clockwise)

Preceding gene: 115351536

Following gene: 115351540

Centisome position: 45.77

GC content: 66.38

Gene sequence:

>1053_bases
ATGGAATACCGCACACTCGGCGATTCGGGCATCGAGGTCAGCCTGATCGGTCTTGGCACGATGACGTGGGGCGAGCAGAA
TTCGGAGCGCGACGCCCACGAGCAGATCGATTACGCGCTCGGGCAGGGCGTCACGTTGATCGACGCCGCGGAGATGTACC
CGGTGCCTCCGAAGCCTGAAACTCAGGGGCGCACGGAGCAGTACATCGGCACCTGGCTCGCGCAGCATCGTGCGCAACGC
GACCGGATCGTGCTCGCGACCAAGATCGCGGGCCCGGCGCGGCAGCCGCACAATCCGCGCCACATTCGCGGCGAAGGTAA
CCAGTTCGACCGCAAGAACCTGACCGAGGCGCTCGACGGCAGCCTCAAGCGCCTGCAGACCGACTATGTCGACCTGTACC
AGTTGCACTGGCCCGATCGCAGCACGACGACGTTTGGTCGCCCCGCGTATCCGTGGGTCGACGATGCGTATACGGTGCCG
ATCGAGGAAACGCTGGGCGTGCTCGCGGAATTCGTGAAGGCCGGCAAGGTCCGCGCGATCGGCGTGTCGAATGAAACGCC
GTGGGGCGTCGCGCAATTCCTGCGCGCGGCCGAGAAGCTCGGGCTGCCGCGCATCGCGAGCATTCAGAACCCGTACAGCC
TGCTGAACCGCACGTTCGAGAACGGCCTGTCCGAGTTCACGCATCGCGATGGCGTCGGCCTGCTCGCCTATTCGCCGCTC
GCATTCGGCTGGCTGTCCGGCAAGTACGAGAACGGCGCGCGTCCGGCCGGCGCGCGCATCACGCTGTTCGAGCGCTTCCA
GCGCTACAGCAAGCCTCACGCGGTCGAAGCGACGTCGCGCTATGTCGCGCTCGCGAAGCGCCACGGGCTGTCGCCCGCGC
AGCTTGCGCTCGCGTTCGTCAACAGCCGGCCGTTCGTCCGCAGCAACCTCGTCGGCGCGACGTCGCTCGACCAGTTGAAG
GAGAACATCGGCAGCATCGACGTGAAGCTGTCCGACGAGATCCTGGCCGAGATCGACGCGCTGCACGAACTGCAGCCGAA
CCCGGCGCCGTAA

Upstream 100 bases:

>100_bases
CACACACCGAAGGCGGCCTGTAAGCATGCGGCCCGGCCATCTGAAGCATTCGGTTCAATGTGATAGCGTTTCTGCTTTCC
ACTGACGTGACAGGAACAGC

Downstream 100 bases:

>100_bases
ACGGCGAGCGGCCCGCGCGGCAGGGTTGCCGCGACGGGCCGCGTCCGACGCGCATCATTGCGCGGTCGTTTCCTTTGCGC
GAGGTCAGCGCATCCCGAGC

Product: aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MEYRTLGDSGIEVSLIGLGTMTWGEQNSERDAHEQIDYALGQGVTLIDAAEMYPVPPKPETQGRTEQYIGTWLAQHRAQR
DRIVLATKIAGPARQPHNPRHIRGEGNQFDRKNLTEALDGSLKRLQTDYVDLYQLHWPDRSTTTFGRPAYPWVDDAYTVP
IEETLGVLAEFVKAGKVRAIGVSNETPWGVAQFLRAAEKLGLPRIASIQNPYSLLNRTFENGLSEFTHRDGVGLLAYSPL
AFGWLSGKYENGARPAGARITLFERFQRYSKPHAVEATSRYVALAKRHGLSPAQLALAFVNSRPFVRSNLVGATSLDQLK
ENIGSIDVKLSDEILAEIDALHELQPNPAP

Sequences:

>Translated_350_residues
MEYRTLGDSGIEVSLIGLGTMTWGEQNSERDAHEQIDYALGQGVTLIDAAEMYPVPPKPETQGRTEQYIGTWLAQHRAQR
DRIVLATKIAGPARQPHNPRHIRGEGNQFDRKNLTEALDGSLKRLQTDYVDLYQLHWPDRSTTTFGRPAYPWVDDAYTVP
IEETLGVLAEFVKAGKVRAIGVSNETPWGVAQFLRAAEKLGLPRIASIQNPYSLLNRTFENGLSEFTHRDGVGLLAYSPL
AFGWLSGKYENGARPAGARITLFERFQRYSKPHAVEATSRYVALAKRHGLSPAQLALAFVNSRPFVRSNLVGATSLDQLK
ENIGSIDVKLSDEILAEIDALHELQPNPAP
>Mature_350_residues
MEYRTLGDSGIEVSLIGLGTMTWGEQNSERDAHEQIDYALGQGVTLIDAAEMYPVPPKPETQGRTEQYIGTWLAQHRAQR
DRIVLATKIAGPARQPHNPRHIRGEGNQFDRKNLTEALDGSLKRLQTDYVDLYQLHWPDRSTTTFGRPAYPWVDDAYTVP
IEETLGVLAEFVKAGKVRAIGVSNETPWGVAQFLRAAEKLGLPRIASIQNPYSLLNRTFENGLSEFTHRDGVGLLAYSPL
AFGWLSGKYENGARPAGARITLFERFQRYSKPHAVEATSRYVALAKRHGLSPAQLALAFVNSRPFVRSNLVGATSLDQLK
ENIGSIDVKLSDEILAEIDALHELQPNPAP

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Homo sapiens, GI27436969, Length=360, Percent_Identity=31.9444444444444, Blast_Score=136, Evalue=2e-32,
Organism=Homo sapiens, GI4504825, Length=355, Percent_Identity=31.830985915493, Blast_Score=135, Evalue=5e-32,
Organism=Homo sapiens, GI27436964, Length=360, Percent_Identity=30.8333333333333, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI27436962, Length=360, Percent_Identity=30.8333333333333, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI27436966, Length=360, Percent_Identity=30.5555555555556, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI27436971, Length=362, Percent_Identity=30.3867403314917, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI41152114, Length=238, Percent_Identity=29.8319327731092, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI41327764, Length=336, Percent_Identity=26.7857142857143, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI223718702, Length=326, Percent_Identity=26.9938650306748, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1789199, Length=350, Percent_Identity=58.2857142857143, Blast_Score=421, Evalue=1e-119,
Organism=Escherichia coli, GI87081735, Length=356, Percent_Identity=28.9325842696629, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1788070, Length=343, Percent_Identity=30.0291545189504, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1789375, Length=348, Percent_Identity=31.6091954022989, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1788081, Length=356, Percent_Identity=27.8089887640449, Blast_Score=81, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6325169, Length=355, Percent_Identity=26.1971830985915, Blast_Score=100, Evalue=6e-22,
Organism=Saccharomyces cerevisiae, GI6323998, Length=352, Percent_Identity=27.5568181818182, Blast_Score=94, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6319958, Length=329, Percent_Identity=27.355623100304, Blast_Score=92, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6319951, Length=337, Percent_Identity=25.8160237388724, Blast_Score=84, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6322615, Length=269, Percent_Identity=25.6505576208178, Blast_Score=80, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6324694, Length=248, Percent_Identity=30.6451612903226, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6320079, Length=235, Percent_Identity=30.2127659574468, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6320576, Length=311, Percent_Identity=26.3665594855305, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24646159, Length=254, Percent_Identity=31.8897637795276, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24646155, Length=357, Percent_Identity=28.0112044817927, Blast_Score=73, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR020471
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: NA

Molecular weight: Translated: 38870; Mature: 38870

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYRTLGDSGIEVSLIGLGTMTWGEQNSERDAHEQIDYALGQGVTLIDAAEMYPVPPKPE
CCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCC
TQGRTEQYIGTWLAQHRAQRDRIVLATKIAGPARQPHNPRHIRGEGNQFDRKNLTEALDG
CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEECCCCCCCCHHHHHHHHHH
SLKRLQTDYVDLYQLHWPDRSTTTFGRPAYPWVDDAYTVPIEETLGVLAEFVKAGKVRAI
HHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCEEEE
GVSNETPWGVAQFLRAAEKLGLPRIASIQNPYSLLNRTFENGLSEFTHRDGVGLLAYSPL
ECCCCCCHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCH
AFGWLSGKYENGARPAGARITLFERFQRYSKPHAVEATSRYVALAKRHGLSPAQLALAFV
HHHHHCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
NSRPFVRSNLVGATSLDQLKENIGSIDVKLSDEILAEIDALHELQPNPAP
CCCCCHHHCCCCCCHHHHHHHHHCCEEEEECHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEYRTLGDSGIEVSLIGLGTMTWGEQNSERDAHEQIDYALGQGVTLIDAAEMYPVPPKPE
CCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCC
TQGRTEQYIGTWLAQHRAQRDRIVLATKIAGPARQPHNPRHIRGEGNQFDRKNLTEALDG
CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEECCCCCCCCHHHHHHHHHH
SLKRLQTDYVDLYQLHWPDRSTTTFGRPAYPWVDDAYTVPIEETLGVLAEFVKAGKVRAI
HHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCEEEE
GVSNETPWGVAQFLRAAEKLGLPRIASIQNPYSLLNRTFENGLSEFTHRDGVGLLAYSPL
ECCCCCCHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCH
AFGWLSGKYENGARPAGARITLFERFQRYSKPHAVEATSRYVALAKRHGLSPAQLALAFV
HHHHHCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
NSRPFVRSNLVGATSLDQLKENIGSIDVKLSDEILAEIDALHELQPNPAP
CCCCCHHHCCCCCCHHHHHHHHHCCEEEEECHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9560382; 9278503 [H]