| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351525
Identifier: 115351525
GI number: 115351525
Start: 1619925
End: 1620443
Strand: Direct
Name: 115351525
Synonym: Bamb_1472
Alternate gene names: NA
Gene position: 1619925-1620443 (Clockwise)
Preceding gene: 115351522
Following gene: 115351528
Centisome position: 45.55
GC content: 63.58
Gene sequence:
>519_bases ATGCCGGAACCCCAAACCATCACGTTGCGCAGCGCGACGTCACACGACGCGGAGCTCGTTGCGCGCTTGCACACGCTGAG CTGGCAGAACGCATACAGCCATATCCTGCCCGCGGCCTATCTGTCCGATGAGGCGCCGACGGAACACGCGAGCCGGTGGC GACGCTATTTCGACCGCAACGAAGCGGAATGGGGCCTCGTGCTGATCGCGGAGTCCGACGGCGCGCCCATCGGTTTCGTG AGCGCCGAAAGACCGGTCGATTCGGCGCTGGGCGTGCTGCTCGATTGCCTTCACGTCCTTCCCGCATATCACGGAAGCGG TATCGGCAAGCGCATGATCGAAGCCGTTCGCGCATGGACGCGAAATATCGGCGTGGACAAGGTTCATCTGTTGGTGCTCG AGGGCAACGTCCGCGCGATTGGTTTCTACGAGCACAACGGCTGGCGATTGGCGGGCGTCGAAACCAGCGTCATCGGCGGG GCGGAAGTCGCCGTCCGAACCTACGTGATCGAGGCCTGA
Upstream 100 bases:
>100_bases CGTGCAGCGTTTGATGCGTTTCGCGATGCAATCGACCGTTTAAAACATCGCGGCTGCTACACTTTCCCGGCCTCAATTAC GCAACGGAAGCGACCCGAGC
Downstream 100 bases:
>100_bases CGGCCTGTCGGCATCGAATCGAACGGCGGCCGACTGCGCGATCCATTCCGCTATCGACCAAGCGCCCGTGCGTCACTCGC CGCAATACCGCACGAGCAAA
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Histone Acetyltransferase HPA2/Related Acetyltransferase; Transcriptional Regulator; Histone Acetyltransferase HPA2-Like Acetyltransferase; GNAT Family N-Acetyltransferase; GNAT Family Acetyltransferase; GCN5 N-Acetyltransferase; Acetyltransferase Family Protein
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MPEPQTITLRSATSHDAELVARLHTLSWQNAYSHILPAAYLSDEAPTEHASRWRRYFDRNEAEWGLVLIAESDGAPIGFV SAERPVDSALGVLLDCLHVLPAYHGSGIGKRMIEAVRAWTRNIGVDKVHLLVLEGNVRAIGFYEHNGWRLAGVETSVIGG AEVAVRTYVIEA
Sequences:
>Translated_172_residues MPEPQTITLRSATSHDAELVARLHTLSWQNAYSHILPAAYLSDEAPTEHASRWRRYFDRNEAEWGLVLIAESDGAPIGFV SAERPVDSALGVLLDCLHVLPAYHGSGIGKRMIEAVRAWTRNIGVDKVHLLVLEGNVRAIGFYEHNGWRLAGVETSVIGG AEVAVRTYVIEA >Mature_171_residues PEPQTITLRSATSHDAELVARLHTLSWQNAYSHILPAAYLSDEAPTEHASRWRRYFDRNEAEWGLVLIAESDGAPIGFVS AERPVDSALGVLLDCLHVLPAYHGSGIGKRMIEAVRAWTRNIGVDKVHLLVLEGNVRAIGFYEHNGWRLAGVETSVIGGA EVAVRTYVIEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18939; Mature: 18807
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPQTITLRSATSHDAELVARLHTLSWQNAYSHILPAAYLSDEAPTEHASRWRRYFDRN CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCC EAEWGLVLIAESDGAPIGFVSAERPVDSALGVLLDCLHVLPAYHGSGIGKRMIEAVRAWT CCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RNIGVDKVHLLVLEGNVRAIGFYEHNGWRLAGVETSVIGGAEVAVRTYVIEA HCCCCCEEEEEEEECCEEEEEEEECCCEEEECCCEEECCCCCEEEEEEEECC >Mature Secondary Structure PEPQTITLRSATSHDAELVARLHTLSWQNAYSHILPAAYLSDEAPTEHASRWRRYFDRN CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCC EAEWGLVLIAESDGAPIGFVSAERPVDSALGVLLDCLHVLPAYHGSGIGKRMIEAVRAWT CCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RNIGVDKVHLLVLEGNVRAIGFYEHNGWRLAGVETSVIGGAEVAVRTYVIEA HCCCCCEEEEEEEECCEEEEEEEECCCEEEECCCEEECCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA