Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351496

Identifier: 115351496

GI number: 115351496

Start: 1592855

End: 1593193

Strand: Direct

Name: 115351496

Synonym: Bamb_1443

Alternate gene names: NA

Gene position: 1592855-1593193 (Clockwise)

Preceding gene: 115351495

Following gene: 115351497

Centisome position: 44.79

GC content: 70.21

Gene sequence:

>339_bases
ATGGCGGCGCGCCGGCGCGACCGCCATCCGGATTGCCACCGGCGCTGCGGCGTCGGTCGTGCGCGTCGAATCCACCCCGA
CTCCGTCCCGACACGGTCACGTGCGCGTCCCGCGCGTCCGTCATTCCCGGCTGAACTTCGCCGCCCGGCGAACCCGCCCC
GCGCATCGCGCGAATTCTCGATCAACTTGATGCGCAGCCCGTCCGGCGAAGCGCAGCCGACGCCGCTGTCGATCCTGCAG
CTCGGCGCGACTGAGCTGTGCGCGACGAACGTACTGACGCCGCATGACGACGATGCGGCGCACGTCCGGGCGCCGGGACG
GATATTTGGAAATCCTTGA

Upstream 100 bases:

>100_bases
GTTGCGTTCGAGCCTCGGATTGCGGCCGAAGAACGGGCTCGTGATCACCACGGTCTACAACTACGGGTACCGACTGGAAC
GGACCTGATCAGTCGACCGG

Downstream 100 bases:

>100_bases
TATTGATTATCAACACGGGAAGCCACTTCGATAATTGCATCCATCTGGCCATGGCAACACGCAATTGGCAATCAATAAAG
GATCAATCATGCATGTGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MAARRRDRHPDCHRRCGVGRARRIHPDSVPTRSRARPARPSFPAELRRPANPPRASREFSINLMRSPSGEAQPTPLSILQ
LGATELCATNVLTPHDDDAAHVRAPGRIFGNP

Sequences:

>Translated_112_residues
MAARRRDRHPDCHRRCGVGRARRIHPDSVPTRSRARPARPSFPAELRRPANPPRASREFSINLMRSPSGEAQPTPLSILQ
LGATELCATNVLTPHDDDAAHVRAPGRIFGNP
>Mature_111_residues
AARRRDRHPDCHRRCGVGRARRIHPDSVPTRSRARPARPSFPAELRRPANPPRASREFSINLMRSPSGEAQPTPLSILQL
GATELCATNVLTPHDDDAAHVRAPGRIFGNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12398; Mature: 12267

Theoretical pI: Translated: 12.13; Mature: 12.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARRRDRHPDCHRRCGVGRARRIHPDSVPTRSRARPARPSFPAELRRPANPPRASREFS
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEE
INLMRSPSGEAQPTPLSILQLGATELCATNVLTPHDDDAAHVRAPGRIFGNP
EEEEECCCCCCCCCCHHHHHHCCHHHHHHCCCCCCCCCCCEEECCCCCCCCC
>Mature Secondary Structure 
AARRRDRHPDCHRRCGVGRARRIHPDSVPTRSRARPARPSFPAELRRPANPPRASREFS
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEE
INLMRSPSGEAQPTPLSILQLGATELCATNVLTPHDDDAAHVRAPGRIFGNP
EEEEECCCCCCCCCCHHHHHHCCHHHHHHCCCCCCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA