Click here to switch to the map view.

The map label for this gene is 115351447

Identifier: 115351447

GI number: 115351447

Start: 1537065

End: 1537475

Strand: Direct

Name: 115351447

Synonym: Bamb_1394

Alternate gene names: NA

Gene position: 1537065-1537475 (Clockwise)

Preceding gene: 115351446

Following gene: 115351452

Centisome position: 43.22

GC content: 63.75

Gene sequence:

>411_bases
ATGACACCGTATCGCGATCTGACCGACCACGAGTGGCACTGCGTCGTGCCGCTTCTGCCCGAAATGCAGCCGCGCACCGA
GTTGCGCGGCCGGCCGTTGGCCAACACGCGCGCCGTCCTGAACGGCGTTCTATGGGTCATCTATAGCGGCGCGACCTGGT
CCGCGATGCCGCGTCGTTACCCTTCATATCAGACATGCCATCGCCGCTTTAAGGTCTGGCACGAGACCGGCACGTTGATG
CAAGTGATGCGTGAGCTGTATGGCGACGCAGGCGTGAATCTGTGCAACGAACTGTCCACGCGGATGCGCAAGCACACGCA
ATCGAAGGCGGCAGAGGCGCGGGGTGCCGCGGCGCCGGTGTATCGTGCACCGGGCAGCTATGCGTCGGATACGCTGAAGC
ACGCAGCGTGA

Upstream 100 bases:

>100_bases
CAAATTATCGCGATCCCCGGGTATTTTCGGACTTGTCTTATATTCATCGTTGAAGTCGGCCGATATCGTTGTGTCATGGT
TCCTAAGGCTGGAGATATCC

Downstream 100 bases:

>100_bases
TGTCGCCCGGTTTCATTCACGCACGCACCCAAACAAAATCGGCCTGACTACATCGCAGGCCGATTTTTCATTGCATCGCG
CGTATCGACGCGCGTCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase A-Like Protein; Transposase Protein; Transposase And Inactivated Derivatives-Like Protein; ISBm1 Transposase OrfA; IS5 Family Transposase OrfA; ISAca3 Transposase OrfA; ISPs1 Transposase OrfA; IS5 Family Transposase

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MTPYRDLTDHEWHCVVPLLPEMQPRTELRGRPLANTRAVLNGVLWVIYSGATWSAMPRRYPSYQTCHRRFKVWHETGTLM
QVMRELYGDAGVNLCNELSTRMRKHTQSKAAEARGAAAPVYRAPGSYASDTLKHAA

Sequences:

>Translated_136_residues
MTPYRDLTDHEWHCVVPLLPEMQPRTELRGRPLANTRAVLNGVLWVIYSGATWSAMPRRYPSYQTCHRRFKVWHETGTLM
QVMRELYGDAGVNLCNELSTRMRKHTQSKAAEARGAAAPVYRAPGSYASDTLKHAA
>Mature_135_residues
TPYRDLTDHEWHCVVPLLPEMQPRTELRGRPLANTRAVLNGVLWVIYSGATWSAMPRRYPSYQTCHRRFKVWHETGTLMQ
VMRELYGDAGVNLCNELSTRMRKHTQSKAAEARGAAAPVYRAPGSYASDTLKHAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15486; Mature: 15355

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPYRDLTDHEWHCVVPLLPEMQPRTELRGRPLANTRAVLNGVLWVIYSGATWSAMPRRY
CCCCCCCCCCCCEEEECCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PSYQTCHRRFKVWHETGTLMQVMRELYGDAGVNLCNELSTRMRKHTQSKAAEARGAAAPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YRAPGSYASDTLKHAA
CCCCCCHHHHHHHHCC
>Mature Secondary Structure 
TPYRDLTDHEWHCVVPLLPEMQPRTELRGRPLANTRAVLNGVLWVIYSGATWSAMPRRY
CCCCCCCCCCCEEEECCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PSYQTCHRRFKVWHETGTLMQVMRELYGDAGVNLCNELSTRMRKHTQSKAAEARGAAAPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YRAPGSYASDTLKHAA
CCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA