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The map label for this gene is ynbC [H]

Identifier: 115351306

GI number: 115351306

Start: 1368193

End: 1369992

Strand: Direct

Name: ynbC [H]

Synonym: Bamb_1253

Alternate gene names: 115351306

Gene position: 1368193-1369992 (Clockwise)

Preceding gene: 115351305

Following gene: 115351307

Centisome position: 38.47

GC content: 70.83

Gene sequence:

>1800_bases
ATGATTCGAACAACGAAACGAGAGAAACGCATGAGCGCACGCACGGCCCGCGAGGCTGACTTCATCACGCACGACGGCGA
AACGCTGTTCTATCGTCACTGGCCCGCGACGGGCCCGCGCTGCCGCGGCGCGATCGTGCTGCTGCATCGCGGCCACGAAC
ATTCGGCGCGCGTCGCGCATCTCGTCGACGAGCTCGACCTGCCGGACTTCGCGTTCTTCGCATGGGATGCGCGCGGCCAC
GGCCGCTCGCCCGGCGCGCGCGGCTACAGCCCGAGCGCGGCCGCGTCGGTGCGCGACCTGCAGATCTTCGTCGAGCATAT
CCGCGACACGCACGGCATCGCGATCGAGGACATCGCCGTGGTCGGGCAGAGCGTCGGCGCGGTGCTCGCGGCCACCTGGG
TACACGATTACGCGCCGCCGATCCGCTGCCTCGTGGTCGCGTCGCCGGCGTTCCACATCAAGCTCTACGTGCCGTTCGCG
CGGCCGGGGCTGCGGCTGATGCACAAGCTGCGCGGGCTGTTCTACGTGAACAGCTACGTGAAACCGAAATTCCTCACGCA
TGACCCCGAACGGATCGCGAGCTATGCGGCCGATCCGCTGATCACGCGGCCGATCGCCGTCAACATGCTGCTCGACCTGC
ACGACACCGCGAAGCGGATCGTCGCCGATGCGGCCGCGATCACCGTGCCGACGCAGCTGCTGATCTCCGGCGCCGACTGG
GTCGTCCATCGCGGCCCGCAAGACCGCTTCTTCGAGCGGCTCGGCGCCGTGCGCAAGGAGCGCATCGTGCTGCCCGGCTT
CTATCACGACACGCTCGGCGAGCGCGACCGCGCGCAGGCGCTCGCGCCGCTGCGCACCTTCGTGCTGCGCGAGTTCGATA
CGCCGAGCCCGCGCGTGTCGCTCGCCGACGCCGACCGGCGCGGCGCATTCCACGACGAATACGCGGCGCTCGGCCGGCCG
CCCGCGAACCCGTTCGCCCGCGCGTACTGGGCGATCACGCGGGCGGGGCTGAAGGCAGGCGGCGCGCTGTCGGACGGCAT
CGCGCTCGGGTTGCGGCTCGGCTTCGATTCGGGCTCGACGCTCGACTACGTGTACCGCAACCGCGCGCAGGGCCGGCTCG
GCGTCGGCGCGCTGATCGACCGCACCTATCTCGATTCGCCGGGCTGGGTCGGCATCCGTCAGCGCAAGGTGCATCTGCAG
GAGCTGATCGGCGCGGCGATCGGGCGGCTGCGCGGCCTCGGCGAACCCGTGCGGATCGTCGACATCGCGGCCGGGCACGG
ACGCTATGTGCTCGACGCGATCGCGACGGCCGCCGAACGCGACGGCGCGGCGCCCGACGACATCACGCTGCGCGACTACA
GCCCGCCGAACGTCGAGGCCGGACGCGTGCTGATCGCGCAGCGCGGCCTCGAGCCGATCGCGCGCTTCGAGCGCGGCGAC
GCGTTCGACGAGGCGTCGCTCGCGACGCTCGAGCCGCGCCCGACGCTCGCGATCGTGTCGGGGCTGTATGAACTGTTCGG
CGAGAACGCGCTGATCGAGCGCTCGCTGCGCGGGCTCGCGCAGGCGGTGCCGCCCGGCGGCTATCTCGTCTATACGGGGC
AGCCGTGGCATCCGCAGCTCGAATTCATCGCGCGTGCGCTGAACAACCATCGCGGCGACGCGACCTGGGTGATGCGCCGC
CGCTCGCAGGCCGAGATGGACGAGCTCGTCGCGCGCGCCGGTTTCCGCAAGCTCGACCAGCGCATCGACGAGATGGGCAT
CTTCACGGTGAGCCTCGCGCAGCGGGTCGACGCGTCGTGA

Upstream 100 bases:

>100_bases
TGCTGTCGATCGTGACGGTGGTGCGGCGCGTGCAGGCCGGCGTCGCCGAAGCGGGCGGCTGACGGTCAACGGATGGGCCG
GCGCCTGAGGGCGGCGCCGC

Downstream 100 bases:

>100_bases
GCGCGCTCGGCGGTGGCGCGGGCGGCGGTCTGGCCGAGCCGGCGGCCGGCGCGCGCGATGCGTCGTTCGCGCTGCGCGTC
GGCTGGCTCGCGGCGATGGG

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 599; Mature: 599

Protein sequence:

>599_residues
MIRTTKREKRMSARTAREADFITHDGETLFYRHWPATGPRCRGAIVLLHRGHEHSARVAHLVDELDLPDFAFFAWDARGH
GRSPGARGYSPSAAASVRDLQIFVEHIRDTHGIAIEDIAVVGQSVGAVLAATWVHDYAPPIRCLVVASPAFHIKLYVPFA
RPGLRLMHKLRGLFYVNSYVKPKFLTHDPERIASYAADPLITRPIAVNMLLDLHDTAKRIVADAAAITVPTQLLISGADW
VVHRGPQDRFFERLGAVRKERIVLPGFYHDTLGERDRAQALAPLRTFVLREFDTPSPRVSLADADRRGAFHDEYAALGRP
PANPFARAYWAITRAGLKAGGALSDGIALGLRLGFDSGSTLDYVYRNRAQGRLGVGALIDRTYLDSPGWVGIRQRKVHLQ
ELIGAAIGRLRGLGEPVRIVDIAAGHGRYVLDAIATAAERDGAAPDDITLRDYSPPNVEAGRVLIAQRGLEPIARFERGD
AFDEASLATLEPRPTLAIVSGLYELFGENALIERSLRGLAQAVPPGGYLVYTGQPWHPQLEFIARALNNHRGDATWVMRR
RSQAEMDELVARAGFRKLDQRIDEMGIFTVSLAQRVDAS

Sequences:

>Translated_599_residues
MIRTTKREKRMSARTAREADFITHDGETLFYRHWPATGPRCRGAIVLLHRGHEHSARVAHLVDELDLPDFAFFAWDARGH
GRSPGARGYSPSAAASVRDLQIFVEHIRDTHGIAIEDIAVVGQSVGAVLAATWVHDYAPPIRCLVVASPAFHIKLYVPFA
RPGLRLMHKLRGLFYVNSYVKPKFLTHDPERIASYAADPLITRPIAVNMLLDLHDTAKRIVADAAAITVPTQLLISGADW
VVHRGPQDRFFERLGAVRKERIVLPGFYHDTLGERDRAQALAPLRTFVLREFDTPSPRVSLADADRRGAFHDEYAALGRP
PANPFARAYWAITRAGLKAGGALSDGIALGLRLGFDSGSTLDYVYRNRAQGRLGVGALIDRTYLDSPGWVGIRQRKVHLQ
ELIGAAIGRLRGLGEPVRIVDIAAGHGRYVLDAIATAAERDGAAPDDITLRDYSPPNVEAGRVLIAQRGLEPIARFERGD
AFDEASLATLEPRPTLAIVSGLYELFGENALIERSLRGLAQAVPPGGYLVYTGQPWHPQLEFIARALNNHRGDATWVMRR
RSQAEMDELVARAGFRKLDQRIDEMGIFTVSLAQRVDAS
>Mature_599_residues
MIRTTKREKRMSARTAREADFITHDGETLFYRHWPATGPRCRGAIVLLHRGHEHSARVAHLVDELDLPDFAFFAWDARGH
GRSPGARGYSPSAAASVRDLQIFVEHIRDTHGIAIEDIAVVGQSVGAVLAATWVHDYAPPIRCLVVASPAFHIKLYVPFA
RPGLRLMHKLRGLFYVNSYVKPKFLTHDPERIASYAADPLITRPIAVNMLLDLHDTAKRIVADAAAITVPTQLLISGADW
VVHRGPQDRFFERLGAVRKERIVLPGFYHDTLGERDRAQALAPLRTFVLREFDTPSPRVSLADADRRGAFHDEYAALGRP
PANPFARAYWAITRAGLKAGGALSDGIALGLRLGFDSGSTLDYVYRNRAQGRLGVGALIDRTYLDSPGWVGIRQRKVHLQ
ELIGAAIGRLRGLGEPVRIVDIAAGHGRYVLDAIATAAERDGAAPDDITLRDYSPPNVEAGRVLIAQRGLEPIARFERGD
AFDEASLATLEPRPTLAIVSGLYELFGENALIERSLRGLAQAVPPGGYLVYTGQPWHPQLEFIARALNNHRGDATWVMRR
RSQAEMDELVARAGFRKLDQRIDEMGIFTVSLAQRVDAS

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787678, Length=588, Percent_Identity=57.4829931972789, Blast_Score=651, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022742
- InterPro:   IPR022744 [H]

Pfam domain/function: PF12146 Hydrolase_4; PF12147 Hydrolase_5 [H]

EC number: NA

Molecular weight: Translated: 66185; Mature: 66185

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTTKREKRMSARTAREADFITHDGETLFYRHWPATGPRCRGAIVLLHRGHEHSARVAH
CCCCCHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHH
LVDELDLPDFAFFAWDARGHGRSPGARGYSPSAAASVRDLQIFVEHIRDTHGIAIEDIAV
HHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VGQSVGAVLAATWVHDYAPPIRCLVVASPAFHIKLYVPFARPGLRLMHKLRGLFYVNSYV
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHEECCCC
KPKFLTHDPERIASYAADPLITRPIAVNMLLDLHDTAKRIVADAAAITVPTQLLISGADW
CCCCCCCCHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCE
VVHRGPQDRFFERLGAVRKERIVLPGFYHDTLGERDRAQALAPLRTFVLREFDTPSPRVS
EEECCCHHHHHHHHHHHHHCCEECCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEE
LADADRRGAFHDEYAALGRPPANPFARAYWAITRAGLKAGGALSDGIALGLRLGFDSGST
ECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCC
LDYVYRNRAQGRLGVGALIDRTYLDSPGWVGIRQRKVHLQELIGAAIGRLRGLGEPVRIV
HHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
DIAAGHGRYVLDAIATAAERDGAAPDDITLRDYSPPNVEAGRVLIAQRGLEPIARFERGD
EEECCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEECCCCHHHHHHHCCC
AFDEASLATLEPRPTLAIVSGLYELFGENALIERSLRGLAQAVPPGGYLVYTGQPWHPQL
CCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHH
EFIARALNNHRGDATWVMRRRSQAEMDELVARAGFRKLDQRIDEMGIFTVSLAQRVDAS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
>Mature Secondary Structure
MIRTTKREKRMSARTAREADFITHDGETLFYRHWPATGPRCRGAIVLLHRGHEHSARVAH
CCCCCHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHH
LVDELDLPDFAFFAWDARGHGRSPGARGYSPSAAASVRDLQIFVEHIRDTHGIAIEDIAV
HHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VGQSVGAVLAATWVHDYAPPIRCLVVASPAFHIKLYVPFARPGLRLMHKLRGLFYVNSYV
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHEECCCC
KPKFLTHDPERIASYAADPLITRPIAVNMLLDLHDTAKRIVADAAAITVPTQLLISGADW
CCCCCCCCHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCE
VVHRGPQDRFFERLGAVRKERIVLPGFYHDTLGERDRAQALAPLRTFVLREFDTPSPRVS
EEECCCHHHHHHHHHHHHHCCEECCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEE
LADADRRGAFHDEYAALGRPPANPFARAYWAITRAGLKAGGALSDGIALGLRLGFDSGST
ECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCC
LDYVYRNRAQGRLGVGALIDRTYLDSPGWVGIRQRKVHLQELIGAAIGRLRGLGEPVRIV
HHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
DIAAGHGRYVLDAIATAAERDGAAPDDITLRDYSPPNVEAGRVLIAQRGLEPIARFERGD
EEECCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEECCCCHHHHHHHCCC
AFDEASLATLEPRPTLAIVSGLYELFGENALIERSLRGLAQAVPPGGYLVYTGQPWHPQL
CCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHH
EFIARALNNHRGDATWVMRRRSQAEMDELVARAGFRKLDQRIDEMGIFTVSLAQRVDAS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]