| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
Click here to switch to the map view.
The map label for this gene is 115351299
Identifier: 115351299
GI number: 115351299
Start: 1361262
End: 1361573
Strand: Direct
Name: 115351299
Synonym: Bamb_1246
Alternate gene names: NA
Gene position: 1361262-1361573 (Clockwise)
Preceding gene: 115351298
Following gene: 115351300
Centisome position: 38.27
GC content: 69.55
Gene sequence:
>312_bases ATGCAACTGCGTGAACTCGCGCATGCGCGCACCGGCGACAAGGGCAATACGCTGAACGTGTCGGTCATCTGCCGCGATCC GCGACACTACGAGCACCTGCGCACGCATCTCGATGCGCGGGCGGTGAAGACGTGGCTCGCGGGCATCGTGCACGGCGACG TCGTGCGCTACGAGCTGCCGGCGCTGGCCGCGTTCAACTTCGTGCTGCGCGATGCGCTGGGCGGCGGCGTCACGCGCTCG CTCGCGCTGGACGCGCACGGCAAGTCGGTCAGTTCGGCGCTGCTGGCGATCGAGGTGCCGGAGCCGGCGTGA
Upstream 100 bases:
>100_bases GCGGCGGCGCGTTCAAGTCGACCCGCGAGGTGATCGCGGTGCAGTCGGTGCTGCTGCCGCGCGCGGCCGTGACGCCGTCG TTTTCATTCGTGGAGGCCTG
Downstream 100 bases:
>100_bases TGATGTGACGGTGTGCGTCGCTGGCGGGGCGTGCGCTCATGGTCACGTTCGCGGTTGCGGAATCGGCCGTTCGCGGCGCC GCGCCTGCGTGCTCGACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MQLRELAHARTGDKGNTLNVSVICRDPRHYEHLRTHLDARAVKTWLAGIVHGDVVRYELPALAAFNFVLRDALGGGVTRS LALDAHGKSVSSALLAIEVPEPA
Sequences:
>Translated_103_residues MQLRELAHARTGDKGNTLNVSVICRDPRHYEHLRTHLDARAVKTWLAGIVHGDVVRYELPALAAFNFVLRDALGGGVTRS LALDAHGKSVSSALLAIEVPEPA >Mature_103_residues MQLRELAHARTGDKGNTLNVSVICRDPRHYEHLRTHLDARAVKTWLAGIVHGDVVRYELPALAAFNFVLRDALGGGVTRS LALDAHGKSVSSALLAIEVPEPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11175; Mature: 11175
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLRELAHARTGDKGNTLNVSVICRDPRHYEHLRTHLDARAVKTWLAGIVHGDVVRYELP CCHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH ALAAFNFVLRDALGGGVTRSLALDAHGKSVSSALLAIEVPEPA HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEECCCCC >Mature Secondary Structure MQLRELAHARTGDKGNTLNVSVICRDPRHYEHLRTHLDARAVKTWLAGIVHGDVVRYELP CCHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH ALAAFNFVLRDALGGGVTRSLALDAHGKSVSSALLAIEVPEPA HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA