The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351298

Identifier: 115351298

GI number: 115351298

Start: 1359901

End: 1361262

Strand: Direct

Name: 115351298

Synonym: Bamb_1245

Alternate gene names: NA

Gene position: 1359901-1361262 (Clockwise)

Preceding gene: 115351297

Following gene: 115351299

Centisome position: 38.24

GC content: 72.91

Gene sequence:

>1362_bases
ATGACAGCAAAGCCACCACACGAACGGCGCGTGCGCATCGGCGCGGGCGCCGGCTACTCGGGCGACCGGATCGAGCCGGC
GGTCGAACTGGCCGAACACGGACAGCTCGACTATCTCGTCTTCGAATGCCTGGCCGAGCGCACGATCGCGATCGCGCAGC
AGGCGCGGCGCAAGGATCCGTCGCTCGGCTACGATCCGCTGCTCGACGCGCGCATGCAGGCCGTGCTGCCGGTGGCCGCG
GCCAAGCGCGTGCGGATCGTGTCGAACATGGGCGCGGCCAACCCGCGCGCGGCCGCGCGGCGCACCGCGCAGATCGCGCG
GTCGCTCGGCCTCGCGGGGCTGAAGGTCGCGGCGGTCGAAGGCGACGACGTGCTCGACGTCGTGCTGCGCGGCGCGTTGC
GCTTCGAGGAGTCGGGCGACGAAGTCGCCGCGTATCGAGAGCGCATCGTATCCGCGAACGCGTATCTCGGCGCCGCGCCG
ATCGTCGACGCGCTCGCGGCCGGCGCGGACGTCGTGCTGACCGGGCGCGTCGCCGATCCGTCGCTGTTCGCCGCGCCGCT
GATCCATGCGTTCGGCTGGCGGATGGACGACTGGGACACGCTGGGGGCCGCGACGGTCGTCGGCCATTTGCTCGAATGCG
CGGGGCAGGTGACGGGCGGCTATTTCGCCGACCCCGGCTACAAGGACGTGCCGGATCTCGCGCGGCTCGGCTTCCCGATC
GGCGAGGTCGCGGCCGACGGCTCGGTCGTGATCACCAAGGTGCCGCACGCGGGCGGCCGCGTGAGCGCGGCGACCTGCAA
GGAACAGCTGCTGTACGAGATCCACGATCCGGCGCGCTACCTGCAGCCCGACGTCGTCGCGGATTTCACGCGCGTGGCCG
TCGCGGAGGAGGCGCCGGACCGCGTGCGCGTGACGGGCGGGCGCGGCACCGCGCGCCCCGACACCCTGAAGGTGTCGGTC
GCGTATGTCGACGGTCATATCGGCGAAGGACAGATCTCGTACGGCGGGCCGGGGGCGCTGGCGCGCGCGCGGCTCGCGCT
CGACATCGTGCGCGAGCGGCTTGCGCTCACCGGCGTGGCCGCGACCGAGTTGCGCTCCGATCTGATCGGCGTCGACGCGC
TGTACGGCGACGCGACGCCCGTCGTGCGCGGCGAGCCGGCCGAAGTCCGCGTGCGGGTGGCTGGCCGCGCGGCGACTGCC
GCCGAGGCCGCGCGGATCGGCAATGAAGTCGAGACGCTGTATACGAACGGGCCGGCCGGCGGCGGCGGCGCGTTCAAGTC
GACCCGCGAGGTGATCGCGGTGCAGTCGGTGCTGCTGCCGCGCGCGGCCGTGACGCCGTCGTTTTCATTCGTGGAGGCCT
GA

Upstream 100 bases:

>100_bases
CCCGCTGCTGTTCGGCGCCTCGATCGTGATGACGATCGCGTGCGTCGTGCTGGGCGTTTTTTGATTGTTCCCGGCGCGCG
CGCCGGATGACGGTACCGAC

Downstream 100 bases:

>100_bases
TGCAACTGCGTGAACTCGCGCATGCGCGCACCGGCGACAAGGGCAATACGCTGAACGTGTCGGTCATCTGCCGCGATCCG
CGACACTACGAGCACCTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MTAKPPHERRVRIGAGAGYSGDRIEPAVELAEHGQLDYLVFECLAERTIAIAQQARRKDPSLGYDPLLDARMQAVLPVAA
AKRVRIVSNMGAANPRAAARRTAQIARSLGLAGLKVAAVEGDDVLDVVLRGALRFEESGDEVAAYRERIVSANAYLGAAP
IVDALAAGADVVLTGRVADPSLFAAPLIHAFGWRMDDWDTLGAATVVGHLLECAGQVTGGYFADPGYKDVPDLARLGFPI
GEVAADGSVVITKVPHAGGRVSAATCKEQLLYEIHDPARYLQPDVVADFTRVAVAEEAPDRVRVTGGRGTARPDTLKVSV
AYVDGHIGEGQISYGGPGALARARLALDIVRERLALTGVAATELRSDLIGVDALYGDATPVVRGEPAEVRVRVAGRAATA
AEAARIGNEVETLYTNGPAGGGGAFKSTREVIAVQSVLLPRAAVTPSFSFVEA

Sequences:

>Translated_453_residues
MTAKPPHERRVRIGAGAGYSGDRIEPAVELAEHGQLDYLVFECLAERTIAIAQQARRKDPSLGYDPLLDARMQAVLPVAA
AKRVRIVSNMGAANPRAAARRTAQIARSLGLAGLKVAAVEGDDVLDVVLRGALRFEESGDEVAAYRERIVSANAYLGAAP
IVDALAAGADVVLTGRVADPSLFAAPLIHAFGWRMDDWDTLGAATVVGHLLECAGQVTGGYFADPGYKDVPDLARLGFPI
GEVAADGSVVITKVPHAGGRVSAATCKEQLLYEIHDPARYLQPDVVADFTRVAVAEEAPDRVRVTGGRGTARPDTLKVSV
AYVDGHIGEGQISYGGPGALARARLALDIVRERLALTGVAATELRSDLIGVDALYGDATPVVRGEPAEVRVRVAGRAATA
AEAARIGNEVETLYTNGPAGGGGAFKSTREVIAVQSVLLPRAAVTPSFSFVEA
>Mature_452_residues
TAKPPHERRVRIGAGAGYSGDRIEPAVELAEHGQLDYLVFECLAERTIAIAQQARRKDPSLGYDPLLDARMQAVLPVAAA
KRVRIVSNMGAANPRAAARRTAQIARSLGLAGLKVAAVEGDDVLDVVLRGALRFEESGDEVAAYRERIVSANAYLGAAPI
VDALAAGADVVLTGRVADPSLFAAPLIHAFGWRMDDWDTLGAATVVGHLLECAGQVTGGYFADPGYKDVPDLARLGFPIG
EVAADGSVVITKVPHAGGRVSAATCKEQLLYEIHDPARYLQPDVVADFTRVAVAEEAPDRVRVTGGRGTARPDTLKVSVA
YVDGHIGEGQISYGGPGALARARLALDIVRERLALTGVAATELRSDLIGVDALYGDATPVVRGEPAEVRVRVAGRAATAA
EAARIGNEVETLYTNGPAGGGGAFKSTREVIAVQSVLLPRAAVTPSFSFVEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47405; Mature: 47274

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAKPPHERRVRIGAGAGYSGDRIEPAVELAEHGQLDYLVFECLAERTIAIAQQARRKDP
CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
SLGYDPLLDARMQAVLPVAAAKRVRIVSNMGAANPRAAARRTAQIARSLGLAGLKVAAVE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
GDDVLDVVLRGALRFEESGDEVAAYRERIVSANAYLGAAPIVDALAAGADVVLTGRVADP
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCC
SLFAAPLIHAFGWRMDDWDTLGAATVVGHLLECAGQVTGGYFADPGYKDVPDLARLGFPI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHCCCH
GEVAADGSVVITKVPHAGGRVSAATCKEQLLYEIHDPARYLQPDVVADFTRVAVAEEAPD
HHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHCCCCC
RVRVTGGRGTARPDTLKVSVAYVDGHIGEGQISYGGPGALARARLALDIVRERLALTGVA
CEEEECCCCCCCCCEEEEEEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
ATELRSDLIGVDALYGDATPVVRGEPAEVRVRVAGRAATAAEAARIGNEVETLYTNGPAG
HHHHHHHHHCHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCHHEEEEECCCCC
GGGAFKSTREVIAVQSVLLPRAAVTPSFSFVEA
CCCCHHHHHHHHHHHHHHHCHHHCCCCCHHHCC
>Mature Secondary Structure 
TAKPPHERRVRIGAGAGYSGDRIEPAVELAEHGQLDYLVFECLAERTIAIAQQARRKDP
CCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
SLGYDPLLDARMQAVLPVAAAKRVRIVSNMGAANPRAAARRTAQIARSLGLAGLKVAAVE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
GDDVLDVVLRGALRFEESGDEVAAYRERIVSANAYLGAAPIVDALAAGADVVLTGRVADP
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCC
SLFAAPLIHAFGWRMDDWDTLGAATVVGHLLECAGQVTGGYFADPGYKDVPDLARLGFPI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHCCCH
GEVAADGSVVITKVPHAGGRVSAATCKEQLLYEIHDPARYLQPDVVADFTRVAVAEEAPD
HHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHCCCCC
RVRVTGGRGTARPDTLKVSVAYVDGHIGEGQISYGGPGALARARLALDIVRERLALTGVA
CEEEECCCCCCCCCEEEEEEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
ATELRSDLIGVDALYGDATPVVRGEPAEVRVRVAGRAATAAEAARIGNEVETLYTNGPAG
HHHHHHHHHCHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCHHEEEEECCCCC
GGGAFKSTREVIAVQSVLLPRAAVTPSFSFVEA
CCCCHHHHHHHHHHHHHHHCHHHCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA