| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is qor [H]
Identifier: 115351287
GI number: 115351287
Start: 1347911
End: 1348891
Strand: Direct
Name: qor [H]
Synonym: Bamb_1234
Alternate gene names: 115351287
Gene position: 1347911-1348891 (Clockwise)
Preceding gene: 115351286
Following gene: 115351290
Centisome position: 37.9
GC content: 71.97
Gene sequence:
>981_bases ATGAAAGCCCTGATGTGTACCGCATTCGGCCCGATCGACCGCTTGCGTATCGACGACGTCGCGATTCCCGAACCGGCCGC GGGCCAGGTGCGGATTCGCGTGAAGGCGGCGTCGCTCAACTTCCCCGATGCGCTGATCGTCCAGGGGTTGTATCAGGTGA AGCCGGCGCTGCCGTTCTCGCCCGGTGCGGAATTCGCCGGCGTGATCGACGCGGTCGGCGACGGCGTGAGCGCGTGGCAG CCGGGCGACGAGGTGGTCGCGTTCACCGGTCACGGCGGCTTCGCCGAGCAGTGTGTGGCCGACGTGCACCAGATCGCGGC GCTGCCGCCGGGGATGACGTTCGAGCAGGGCGCGGCGCTGGTGCTGGCCTACGGCACGTCGCTGCATGCGCTGCAGCAGC GCGCGCGTCTGCAGCAGGGCGAGACGCTGCTGGTGCTGGGGGCGGCGGGCGGCGTCGGGCTGGCGGCGATCGAGATCGCG AAGGCGCTGGGCGCGCGCGTGATCGCGGCCGCGTCGAGCGCGGACAAGCTCGCGCTGTGCCGCGCAGCGGGCGCCGACGA CACGATCGACTATGCGACCGAGGACCTGCGGCGCCGCGTCGATGAACTGACGGGCGGGCGCGGCGCGGACGTCGTCTACG ATCCGGTCGGCGGCGCGTACAGCGAGGCGGCGCTGCGCGCGACCGCGTGGCGCGGCCGGTTCCTCGTGGTCGGTTTCGCG GCCGGCGAGATTCCGAAGATCGCGCTGAACCTGGCGCTGCTGAAGGAGCGCGATATTCTCGGCGTGTTCTGGGGCGACGC GGTGCGGCGCGATCCCGCGGAGCACGCGGTGAACATGCGCCAGCTGGCGCAATGGTTCGCGGCCGGCAAGGTGCGGCCGG CGATCACCGAGCGCGTGCCGCTGTCGGGTGCGGCCGACGCGATCGCGCGCATGGCGAACCGGCAGGTCAAGGGCAAGGTC GTGATTCTGCCGGACGCGTGA
Upstream 100 bases:
>100_bases CGCGGTGCAGGCCGATGTGCGTGCGCCGCGCGCCGCTTGCGCGGGCGTGTCCCGCTGCCGTATCGATGCGCGGCGACGTC GCGCAAGGAGAGAGGAAAGC
Downstream 100 bases:
>100_bases TTACGCTGACAATGGACCATGCAGCGGCGGTCCGATGCGCGGCGGGCGGGAGTGGGGCGGCGCATCATGTACCGCCGTGC CGCCGTGCCGCCGTGCCGCC
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MKALMCTAFGPIDRLRIDDVAIPEPAAGQVRIRVKAASLNFPDALIVQGLYQVKPALPFSPGAEFAGVIDAVGDGVSAWQ PGDEVVAFTGHGGFAEQCVADVHQIAALPPGMTFEQGAALVLAYGTSLHALQQRARLQQGETLLVLGAAGGVGLAAIEIA KALGARVIAAASSADKLALCRAAGADDTIDYATEDLRRRVDELTGGRGADVVYDPVGGAYSEAALRATAWRGRFLVVGFA AGEIPKIALNLALLKERDILGVFWGDAVRRDPAEHAVNMRQLAQWFAAGKVRPAITERVPLSGAADAIARMANRQVKGKV VILPDA
Sequences:
>Translated_326_residues MKALMCTAFGPIDRLRIDDVAIPEPAAGQVRIRVKAASLNFPDALIVQGLYQVKPALPFSPGAEFAGVIDAVGDGVSAWQ PGDEVVAFTGHGGFAEQCVADVHQIAALPPGMTFEQGAALVLAYGTSLHALQQRARLQQGETLLVLGAAGGVGLAAIEIA KALGARVIAAASSADKLALCRAAGADDTIDYATEDLRRRVDELTGGRGADVVYDPVGGAYSEAALRATAWRGRFLVVGFA AGEIPKIALNLALLKERDILGVFWGDAVRRDPAEHAVNMRQLAQWFAAGKVRPAITERVPLSGAADAIARMANRQVKGKV VILPDA >Mature_326_residues MKALMCTAFGPIDRLRIDDVAIPEPAAGQVRIRVKAASLNFPDALIVQGLYQVKPALPFSPGAEFAGVIDAVGDGVSAWQ PGDEVVAFTGHGGFAEQCVADVHQIAALPPGMTFEQGAALVLAYGTSLHALQQRARLQQGETLLVLGAAGGVGLAAIEIA KALGARVIAAASSADKLALCRAAGADDTIDYATEDLRRRVDELTGGRGADVVYDPVGGAYSEAALRATAWRGRFLVVGFA AGEIPKIALNLALLKERDILGVFWGDAVRRDPAEHAVNMRQLAQWFAAGKVRPAITERVPLSGAADAIARMANRQVKGKV VILPDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI194239674, Length=326, Percent_Identity=32.2085889570552, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI13236495, Length=326, Percent_Identity=32.2085889570552, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI18379349, Length=343, Percent_Identity=31.1953352769679, Blast_Score=145, Evalue=4e-35, Organism=Homo sapiens, GI194239676, Length=211, Percent_Identity=37.4407582938389, Blast_Score=135, Evalue=5e-32, Organism=Homo sapiens, GI24308257, Length=241, Percent_Identity=31.1203319502075, Blast_Score=121, Evalue=9e-28, Organism=Homo sapiens, GI22538446, Length=234, Percent_Identity=30.7692307692308, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI22538444, Length=234, Percent_Identity=30.7692307692308, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI28557745, Length=251, Percent_Identity=33.0677290836653, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI47519420, Length=336, Percent_Identity=27.6785714285714, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI41872631, Length=303, Percent_Identity=30.6930693069307, Blast_Score=85, Evalue=9e-17, Organism=Homo sapiens, GI156627571, Length=336, Percent_Identity=28.2738095238095, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI67078404, Length=291, Percent_Identity=26.8041237113402, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI67078406, Length=285, Percent_Identity=26.6666666666667, Blast_Score=71, Evalue=1e-12, Organism=Escherichia coli, GI1790485, Length=310, Percent_Identity=34.5161290322581, Blast_Score=137, Evalue=9e-34, Organism=Escherichia coli, GI87082125, Length=368, Percent_Identity=28.5326086956522, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788407, Length=341, Percent_Identity=26.3929618768328, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI226510941, Length=334, Percent_Identity=28.1437125748503, Blast_Score=70, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17507255, Length=323, Percent_Identity=27.8637770897833, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI133901712, Length=282, Percent_Identity=29.7872340425532, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI133901710, Length=282, Percent_Identity=29.7872340425532, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17536829, Length=323, Percent_Identity=24.4582043343653, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17562876, Length=291, Percent_Identity=28.5223367697594, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17556000, Length=170, Percent_Identity=30.5882352941176, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71987554, Length=347, Percent_Identity=25.3602305475504, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6319520, Length=331, Percent_Identity=27.4924471299094, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6324486, Length=338, Percent_Identity=27.2189349112426, Blast_Score=98, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6323961, Length=338, Percent_Identity=26.3313609467456, Blast_Score=96, Evalue=6e-21, Organism=Saccharomyces cerevisiae, GI6319621, Length=338, Percent_Identity=26.3313609467456, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6323729, Length=342, Percent_Identity=24.5614035087719, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI24581345, Length=329, Percent_Identity=25.8358662613982, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI221330659, Length=304, Percent_Identity=26.6447368421053, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI19920632, Length=304, Percent_Identity=26.6447368421053, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI45550423, Length=334, Percent_Identity=23.9520958083832, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34075; Mature: 34075
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALMCTAFGPIDRLRIDDVAIPEPAAGQVRIRVKAASLNFPDALIVQGLYQVKPALPFS CCCEEEECCCCCCCEEECCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCC PGAEFAGVIDAVGDGVSAWQPGDEVVAFTGHGGFAEQCVADVHQIAALPPGMTFEQGAAL CCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEE VLAYGTSLHALQQRARLQQGETLLVLGAAGGVGLAAIEIAKALGARVIAAASSADKLALC EEEECCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHEEEECCCCCHHHHH RAAGADDTIDYATEDLRRRVDELTGGRGADVVYDPVGGAYSEAALRATAWRGRFLVVGFA HHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCCEEEEEEEC AGEIPKIALNLALLKERDILGVFWGDAVRRDPAEHAVNMRQLAQWFAAGKVRPAITERVP CCCCCHHHHHHHHHCCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCC LSGAADAIARMANRQVKGKVVILPDA CCCHHHHHHHHHCCCCCCEEEEECCC >Mature Secondary Structure MKALMCTAFGPIDRLRIDDVAIPEPAAGQVRIRVKAASLNFPDALIVQGLYQVKPALPFS CCCEEEECCCCCCCEEECCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCC PGAEFAGVIDAVGDGVSAWQPGDEVVAFTGHGGFAEQCVADVHQIAALPPGMTFEQGAAL CCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEE VLAYGTSLHALQQRARLQQGETLLVLGAAGGVGLAAIEIAKALGARVIAAASSADKLALC EEEECCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHEEEECCCCCHHHHH RAAGADDTIDYATEDLRRRVDELTGGRGADVVYDPVGGAYSEAALRATAWRGRFLVVGFA HHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCCEEEEEEEC AGEIPKIALNLALLKERDILGVFWGDAVRRDPAEHAVNMRQLAQWFAAGKVRPAITERVP CCCCCHHHHHHHHHCCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCC LSGAADAIARMANRQVKGKVVILPDA CCCHHHHHHHHHCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]