| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is uppP1 [H]
Identifier: 115351257
GI number: 115351257
Start: 1319308
End: 1320138
Strand: Direct
Name: uppP1 [H]
Synonym: Bamb_1204
Alternate gene names: 115351257
Gene position: 1319308-1320138 (Clockwise)
Preceding gene: 115351251
Following gene: 115351258
Centisome position: 37.1
GC content: 64.62
Gene sequence:
>831_bases GTGAGTCTCTGGTTTCTGGTATTCCTGAGCGTCCTGCAGGGCGTTACCGAACTCTTCCCCGTCAGCAGTCTCGGCCACAC GCTGCTCGTGCCGGCGTTGTTCGGCATGCACATCGACAAGCATGCGCCGCAGTTGCTGCCGTTCCTCGTCGCGCTGCACC TCGGCACCGCGCTCGCGCTGCTGTGGTATTTCCGTGCGCGCTGGATCGCGCTGATCAGCGGCTTCTTCGCGCAGCTCGGC GGCCGCAAGAACGACGACGGGCACCTGATGTGGGCGCTGATCATCGGCACGATCCCGACCGGGATCGTCGGCCTGCTGCT CGAGAAGCGCCTCGAGCGCGTGTTTCACGATCTGCGGATCGTTGCGGTCGCGCTGATCATCAACGGCGTGCTGCTGTGGG TCGGCGACCGCATTCAGCGCAGCCGTGCGCACCAGGCGCCGGAGAAGATGACGTTCAAGCAGGCGTTCTTCGTCGGCCTC GCGCAGATCGGCGCGCTGATTCCGGGATTTTCGCGCAGCGGCCTGACGATGATCGCCGGCAATGTAGCCGGGCTGACGGC GGAGAAGGCGGCGGAGTTTTCATTCCTGCTCGGCACGCCGATCATTTTTGCCGCGGGCGTGCTCGAGTTGCCGAAGCTCT TTCATGCGCGCGACCAGCTCATGGACGCGCTGCTCGGCGGCGTGCTGACGGCGATTGCCGCTTATCTGAGCGTGCGGTTT CTGATGCGCTATTTCGAAGGGCGCGGGCGGCTGGCTTCGTTCGGCGTGTATTGCGTGATCGCCGGCGTGTTCTTCCTCGG CTGGTTCATGCTGCATCCGCAGCCGGTTTGA
Upstream 100 bases:
>100_bases CGGTAATCCTGGCTGGGCATAATCGGGGCGCGTTTTTTTCGGACGCGCGCTGCGTCGTCCGCTTGTTCACCCGATTGCTC ATCACTAAAAGGACCGACGC
Downstream 100 bases:
>100_bases CGGTTGCGGCGCCGGTCGCGCGTGATATGACGCGATGATCGGGTATAATTTCGGGCTCGGCTTCATGCCGGGCCCGTTTC GTTTCGGGGCTTTGAGTTCG
Product: undecaprenyl pyrophosphate phosphatase
Products: NA
Alternate protein names: Bacitracin resistance protein 1; Undecaprenyl pyrophosphate phosphatase 1 [H]
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSLWFLVFLSVLQGVTELFPVSSLGHTLLVPALFGMHIDKHAPQLLPFLVALHLGTALALLWYFRARWIALISGFFAQLG GRKNDDGHLMWALIIGTIPTGIVGLLLEKRLERVFHDLRIVAVALIINGVLLWVGDRIQRSRAHQAPEKMTFKQAFFVGL AQIGALIPGFSRSGLTMIAGNVAGLTAEKAAEFSFLLGTPIIFAAGVLELPKLFHARDQLMDALLGGVLTAIAAYLSVRF LMRYFEGRGRLASFGVYCVIAGVFFLGWFMLHPQPV
Sequences:
>Translated_276_residues MSLWFLVFLSVLQGVTELFPVSSLGHTLLVPALFGMHIDKHAPQLLPFLVALHLGTALALLWYFRARWIALISGFFAQLG GRKNDDGHLMWALIIGTIPTGIVGLLLEKRLERVFHDLRIVAVALIINGVLLWVGDRIQRSRAHQAPEKMTFKQAFFVGL AQIGALIPGFSRSGLTMIAGNVAGLTAEKAAEFSFLLGTPIIFAAGVLELPKLFHARDQLMDALLGGVLTAIAAYLSVRF LMRYFEGRGRLASFGVYCVIAGVFFLGWFMLHPQPV >Mature_275_residues SLWFLVFLSVLQGVTELFPVSSLGHTLLVPALFGMHIDKHAPQLLPFLVALHLGTALALLWYFRARWIALISGFFAQLGG RKNDDGHLMWALIIGTIPTGIVGLLLEKRLERVFHDLRIVAVALIINGVLLWVGDRIQRSRAHQAPEKMTFKQAFFVGLA QIGALIPGFSRSGLTMIAGNVAGLTAEKAAEFSFLLGTPIIFAAGVLELPKLFHARDQLMDALLGGVLTAIAAYLSVRFL MRYFEGRGRLASFGVYCVIAGVFFLGWFMLHPQPV
Specific function: Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin [H]
COG id: COG1968
COG function: function code V; Uncharacterized bacitracin resistance protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uppP family [H]
Homologues:
Organism=Escherichia coli, GI1789437, Length=215, Percent_Identity=35.3488372093023, Blast_Score=106, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003824 [H]
Pfam domain/function: PF02673 BacA [H]
EC number: =3.6.1.27 [H]
Molecular weight: Translated: 30339; Mature: 30208
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLWFLVFLSVLQGVTELFPVSSLGHTLLVPALFGMHIDKHAPQLLPFLVALHLGTALAL CHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LWYFRARWIALISGFFAQLGGRKNDDGHLMWALIIGTIPTGIVGLLLEKRLERVFHDLRI HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAVALIINGVLLWVGDRIQRSRAHQAPEKMTFKQAFFVGLAQIGALIPGFSRSGLTMIAG HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCC NVAGLTAEKAAEFSFLLGTPIIFAAGVLELPKLFHARDQLMDALLGGVLTAIAAYLSVRF CHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMRYFEGRGRLASFGVYCVIAGVFFLGWFMLHPQPV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SLWFLVFLSVLQGVTELFPVSSLGHTLLVPALFGMHIDKHAPQLLPFLVALHLGTALAL HHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LWYFRARWIALISGFFAQLGGRKNDDGHLMWALIIGTIPTGIVGLLLEKRLERVFHDLRI HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAVALIINGVLLWVGDRIQRSRAHQAPEKMTFKQAFFVGLAQIGALIPGFSRSGLTMIAG HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCC NVAGLTAEKAAEFSFLLGTPIIFAAGVLELPKLFHARDQLMDALLGGVLTAIAAYLSVRF CHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMRYFEGRGRLASFGVYCVIAGVFFLGWFMLHPQPV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA