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The map label for this gene is fabD [H]

Identifier: 115351206

GI number: 115351206

Start: 1262002

End: 1262934

Strand: Direct

Name: fabD [H]

Synonym: Bamb_1153

Alternate gene names: 115351206

Gene position: 1262002-1262934 (Clockwise)

Preceding gene: 115351205

Following gene: 115351207

Centisome position: 35.48

GC content: 74.38

Gene sequence:

>933_bases
ATGACGCTGGCGATCCTCTGTTCGGGGCAAGGCGCGCAGCGCGCGGACATGTTCGAGCTGACTGGCGCGGTGCCGCAGGC
CGATGCGCTGTTCGCGCACGCCGGCCGGCTCCTCGGCGACGATCCGCGCAACTGGGTGCGGCACGCCGAACCGGACGCGC
TGCACGAGAACCGCGCAGCGCAGCTTCTCTGCACGCTGCAGGCGCTCGCGGCGGCCGCGTTGCTCGATACGGTGTGGCCG
CGGCGTCGCTGTGTCGCGGGATACAGCGTCGGCGAAGTCGCGTCGTGGAGCGTCGCGGGGATGATCGATCCGCACGACGC
GCTGGATCTTGCCGATGCACGCGCCCGCGCCATGGACGCCGCGAGCGGCGGCGATGAACGGATGGCGTTCGTGCGCGGGC
TGACGCGCGCGCAGCTCGCGCGGCTGTGCGACGGACGCGATGCCGCGATCGCGATCGCCAATCCCGGCGACGCGTTCGTG
GTGGCCGGGCGGCAGGCCGACGTCGCCGCGGTGGCCGACGACGCCGCCCGCGATGGGGCGCTGCGCGTGGCGCCCGTGTG
CGTGCGGATCGCATCGCACACGCGGCGACTCGTGTTGGCGGTCCCCGCGTTTCGCGCGTCGCTGGCCGCCGTGAACGTGC
ACCGGCCGCCGCCCGGCACGCGACTGTTTTCGGGGATCGACGGCGCGTCGGTGCTCGATGTTGGCGCGGGGCTCGACAAG
CTCGCGCGGCAGATCGCGGAGCCGGTCGAGTGGGCGGCCTGCCTGGCCGCGTGCGTCGAGGCCGGCGCGACCGCGTTTCT
CGAACTCGGCCCCGGTCGCGCGCTGACCGAGATGGCGGGCGGCGCGTATCCGGCGCTGCCGGCGCGCAGCGTCGCGGATT
TCCGTTCCGTCGACGGTATCGCGAGCTGGCTCGCGCGCGTCGCGGCCGGCTGA

Upstream 100 bases:

>100_bases
ACCGCGCGTTCGTTGCCCGCCGGCTGAGCCCGGGCGGCGCGGCCGACCTGCTGGCGATGAGCGTGTTCGTCGATGCGCTC
GAAGCGGTCGAGGAGGCGCG

Downstream 100 bases:

>100_bases
CCGGCGGCGCGCAAGCGCCCCACAAGCGCCCCGGCATCGCGGCGCATCGATTCGGAAACCGTTCGGTTCGAGGGCCATTC
CGCGGCGTGTGTTGCGCCGG

Product: acyl-carrier-protein S-malonyltransferase

Products: NA

Alternate protein names: MCT [H]

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MTLAILCSGQGAQRADMFELTGAVPQADALFAHAGRLLGDDPRNWVRHAEPDALHENRAAQLLCTLQALAAAALLDTVWP
RRRCVAGYSVGEVASWSVAGMIDPHDALDLADARARAMDAASGGDERMAFVRGLTRAQLARLCDGRDAAIAIANPGDAFV
VAGRQADVAAVADDAARDGALRVAPVCVRIASHTRRLVLAVPAFRASLAAVNVHRPPPGTRLFSGIDGASVLDVGAGLDK
LARQIAEPVEWAACLAACVEAGATAFLELGPGRALTEMAGGAYPALPARSVADFRSVDGIASWLARVAAG

Sequences:

>Translated_310_residues
MTLAILCSGQGAQRADMFELTGAVPQADALFAHAGRLLGDDPRNWVRHAEPDALHENRAAQLLCTLQALAAAALLDTVWP
RRRCVAGYSVGEVASWSVAGMIDPHDALDLADARARAMDAASGGDERMAFVRGLTRAQLARLCDGRDAAIAIANPGDAFV
VAGRQADVAAVADDAARDGALRVAPVCVRIASHTRRLVLAVPAFRASLAAVNVHRPPPGTRLFSGIDGASVLDVGAGLDK
LARQIAEPVEWAACLAACVEAGATAFLELGPGRALTEMAGGAYPALPARSVADFRSVDGIASWLARVAAG
>Mature_309_residues
TLAILCSGQGAQRADMFELTGAVPQADALFAHAGRLLGDDPRNWVRHAEPDALHENRAAQLLCTLQALAAAALLDTVWPR
RRCVAGYSVGEVASWSVAGMIDPHDALDLADARARAMDAASGGDERMAFVRGLTRAQLARLCDGRDAAIAIANPGDAFVV
AGRQADVAAVADDAARDGALRVAPVCVRIASHTRRLVLAVPAFRASLAAVNVHRPPPGTRLFSGIDGASVLDVGAGLDKL
ARQIAEPVEWAACLAACVEAGATAFLELGPGRALTEMAGGAYPALPARSVADFRSVDGIASWLARVAAG

Specific function: Fatty acid biosynthesis. [C]

COG id: COG0331

COG function: function code I; (acyl-carrier-protein) S-malonyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fabD family [H]

Homologues:

Organism=Homo sapiens, GI51243059, Length=292, Percent_Identity=27.7397260273973, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1787334, Length=285, Percent_Identity=27.719298245614, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001227
- InterPro:   IPR014043
- InterPro:   IPR016035
- InterPro:   IPR004410
- InterPro:   IPR016036 [H]

Pfam domain/function: PF00698 Acyl_transf_1 [H]

EC number: =2.3.1.39 [H]

Molecular weight: Translated: 32080; Mature: 31949

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLAILCSGQGAQRADMFELTGAVPQADALFAHAGRLLGDDPRNWVRHAEPDALHENRAA
CEEEEEECCCCCCCCHHHHHHCCCCCHHHHHHHHCHHCCCCHHHHHHCCCCCHHHHHHHH
QLLCTLQALAAAALLDTVWPRRRCVAGYSVGEVASWSVAGMIDPHDALDLADARARAMDA
HHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHC
ASGGDERMAFVRGLTRAQLARLCDGRDAAIAIANPGDAFVVAGRQADVAAVADDAARDGA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHCCCC
LRVAPVCVRIASHTRRLVLAVPAFRASLAAVNVHRPPPGTRLFSGIDGASVLDVGAGLDK
EEHHHHHHHHHHHCCEEEEEEHHHHHHHHEEEECCCCCCCHHHCCCCCCHHHHHCCCHHH
LARQIAEPVEWAACLAACVEAGATAFLELGPGRALTEMAGGAYPALPARSVADFRSVDGI
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHHH
ASWLARVAAG
HHHHHHHHCC
>Mature Secondary Structure 
TLAILCSGQGAQRADMFELTGAVPQADALFAHAGRLLGDDPRNWVRHAEPDALHENRAA
EEEEEECCCCCCCCHHHHHHCCCCCHHHHHHHHCHHCCCCHHHHHHCCCCCHHHHHHHH
QLLCTLQALAAAALLDTVWPRRRCVAGYSVGEVASWSVAGMIDPHDALDLADARARAMDA
HHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHC
ASGGDERMAFVRGLTRAQLARLCDGRDAAIAIANPGDAFVVAGRQADVAAVADDAARDGA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHCCCC
LRVAPVCVRIASHTRRLVLAVPAFRASLAAVNVHRPPPGTRLFSGIDGASVLDVGAGLDK
EEHHHHHHHHHHHCCEEEEEEHHHHHHHHEEEECCCCCCCHHHCCCCCCHHHHHCCCHHH
LARQIAEPVEWAACLAACVEAGATAFLELGPGRALTEMAGGAYPALPARSVADFRSVDGI
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHHH
ASWLARVAAG
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]