The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351200

Identifier: 115351200

GI number: 115351200

Start: 1256890

End: 1258536

Strand: Direct

Name: 115351200

Synonym: Bamb_1147

Alternate gene names: NA

Gene position: 1256890-1258536 (Clockwise)

Preceding gene: 115351199

Following gene: 115351201

Centisome position: 35.34

GC content: 68.73

Gene sequence:

>1647_bases
ATGACGGGATGGAATCACGCGCGGCAAGCGCGCGACGCACGCCTCGCGGCCGGCGCGGCGTACGTGCAGGGCAAGCGGGT
CGATGCGCGCGACACCGTCGCGTTGCTCGAAGCGGTGCTGCGGCCCGGCGACCGCGTTTGCCTCGAAGGCGACAACCAGA
AACAGGCCGACCTGCTCGCGACGGCGCTCGCCGACGTCGACAGCGCGAAGATCCACGACCTGCACATGGTGCAGTCGGGC
GTCGTGCTGCCCGAGCATCTCGACGTGTTCGAGCGCGGGATCGCGAAGCGTCTCGACTTCGCGTATTCGGGCCCGCAGTC
GCAGCGGATCGCGAAGCTGCTGTTCGGCGGCAAGATCGCGCTCGGCGCGGTGCACACGTATCTCGAGCTGTTCGCTCGCT
ACTTCATCGATCTCACGCCGCAGGTCGCGCTGATCGCGGCGGTCAGCGCCGATCGCGACGGCAACCTGTACACCGGCCCG
AACACGGAAGACACGCCGACCGTCGTCGAGGCCACCGCGTTCAAGGACGGCATCGTGATCGCGCAGGTCGACCGCATCGT
CGACAAGGTGCCGCGCGTCGACATTCCCGGCGACCGCGTGCATTTCGTCGTCGAGGCCGGCCGGCCGTTCTACGTCGAGC
CGCTGTTCACGCGCGACCCGGCCGCGATCACCGAAACGCAGATCCTGACCGCGATGCTCGCGATCAAGGGCATCTACGAA
CCGTACGGGATCAAGCGCCTGAACCACGGGATCGGCTTCAACACGGCCGCGATCGAGCTGCTTCTGCCCACCTACGGCGC
GAAGCTCGGGCTCAAGGGCAAGGTCTGCACGCACTGGGCGCTCAATCCGCACCCGACGCTGATCCCCGCGATCGAGTCGG
GCTGGGTCGAGCAGATTCACTGCTTCGGTTCCGAAGTGGGGATGGACGACTACATCCGCGCGCGCTCCGACGTGTGGTTC
ACGGGCCCCGACGGGTCGCTGCGCTCGAACCGCGCGTTCTGCCAGACCGCGGGCCTCTATGCGTGCGACATGTTCATCGG
CTCGACGCTGCAGATCGACCTGGCGGGCCATTCGTCGACGGTCACGGCCGAGCGGATCGCCGGCTTCGGCGGCGCGCCGA
ACATGGGCAGCGACGCGCGCGGCCGGCGTCATCCGAGCGAGCCGTGGCTGAAGGCCGGCGCGCAAGCCGATCCCGACACG
CCGGCGGCGCTCAGGCGCGGCCGCAAGCTGGTCGTGCAGATCGGCGAGACGTTCGGCGACAAGAACGTGCCGATGTTCGT
CGAGAAGCTCGACGCGCTGAAGCTCGCCGACAAGCTGCAGCTCGACCTCGCGCCGATCATGGTCTACGGCGACGACGTCA
CGCACATCGTCACCGAGGAAGGGATCGCGAACCTGCTGATGTGCCGCGACAAGGATGAGCGCGAGCACGCGATCCGCGGC
GTGGCCGGGTATACCGAGGTCGGCCGCGGCCGCGACCGCAGGATGGTCGAGCGGCTGCGCGAGCGCGGCGTGATCCGGCG
TCCGGAGGATCTCGGCATCGATCCGCTCGACGCCGACCGCCGCTGGCTCGCCGCGCGTTCGATCAAGGATCTCGTGCATT
GGTCGGGCGGCCTCTATGCGCCGCCGGCCCGGTTCCGCAACTGGTGA

Upstream 100 bases:

>100_bases
TCCATCGCGGCGCCCTCTGAGTCGCATTCTTCAACATCATCAATCGACGGCGGCGCCAGGCTTAGAATGCCGCTGGACCA
TCGAAGCGGGAGAACTGTTC

Downstream 100 bases:

>100_bases
GGAAGAGGGCATGGAACAGTTGAACTACCGCTTCACCGCGCGCGAGCGCGCGCAGGGCGAACGGGCCACGGCGCTCGTCG
GCGTGGTCGCGTCCGGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Alpha Subunit Of Malonate Decarboxylase; Malonate Decarboxylase Subunit Alpha; Malonate Decarboxylase Alpha-Subunit; Subunit Alpha Of Malonate Decarboxylase

Number of amino acids: Translated: 548; Mature: 547

Protein sequence:

>548_residues
MTGWNHARQARDARLAAGAAYVQGKRVDARDTVALLEAVLRPGDRVCLEGDNQKQADLLATALADVDSAKIHDLHMVQSG
VVLPEHLDVFERGIAKRLDFAYSGPQSQRIAKLLFGGKIALGAVHTYLELFARYFIDLTPQVALIAAVSADRDGNLYTGP
NTEDTPTVVEATAFKDGIVIAQVDRIVDKVPRVDIPGDRVHFVVEAGRPFYVEPLFTRDPAAITETQILTAMLAIKGIYE
PYGIKRLNHGIGFNTAAIELLLPTYGAKLGLKGKVCTHWALNPHPTLIPAIESGWVEQIHCFGSEVGMDDYIRARSDVWF
TGPDGSLRSNRAFCQTAGLYACDMFIGSTLQIDLAGHSSTVTAERIAGFGGAPNMGSDARGRRHPSEPWLKAGAQADPDT
PAALRRGRKLVVQIGETFGDKNVPMFVEKLDALKLADKLQLDLAPIMVYGDDVTHIVTEEGIANLLMCRDKDEREHAIRG
VAGYTEVGRGRDRRMVERLRERGVIRRPEDLGIDPLDADRRWLAARSIKDLVHWSGGLYAPPARFRNW

Sequences:

>Translated_548_residues
MTGWNHARQARDARLAAGAAYVQGKRVDARDTVALLEAVLRPGDRVCLEGDNQKQADLLATALADVDSAKIHDLHMVQSG
VVLPEHLDVFERGIAKRLDFAYSGPQSQRIAKLLFGGKIALGAVHTYLELFARYFIDLTPQVALIAAVSADRDGNLYTGP
NTEDTPTVVEATAFKDGIVIAQVDRIVDKVPRVDIPGDRVHFVVEAGRPFYVEPLFTRDPAAITETQILTAMLAIKGIYE
PYGIKRLNHGIGFNTAAIELLLPTYGAKLGLKGKVCTHWALNPHPTLIPAIESGWVEQIHCFGSEVGMDDYIRARSDVWF
TGPDGSLRSNRAFCQTAGLYACDMFIGSTLQIDLAGHSSTVTAERIAGFGGAPNMGSDARGRRHPSEPWLKAGAQADPDT
PAALRRGRKLVVQIGETFGDKNVPMFVEKLDALKLADKLQLDLAPIMVYGDDVTHIVTEEGIANLLMCRDKDEREHAIRG
VAGYTEVGRGRDRRMVERLRERGVIRRPEDLGIDPLDADRRWLAARSIKDLVHWSGGLYAPPARFRNW
>Mature_547_residues
TGWNHARQARDARLAAGAAYVQGKRVDARDTVALLEAVLRPGDRVCLEGDNQKQADLLATALADVDSAKIHDLHMVQSGV
VLPEHLDVFERGIAKRLDFAYSGPQSQRIAKLLFGGKIALGAVHTYLELFARYFIDLTPQVALIAAVSADRDGNLYTGPN
TEDTPTVVEATAFKDGIVIAQVDRIVDKVPRVDIPGDRVHFVVEAGRPFYVEPLFTRDPAAITETQILTAMLAIKGIYEP
YGIKRLNHGIGFNTAAIELLLPTYGAKLGLKGKVCTHWALNPHPTLIPAIESGWVEQIHCFGSEVGMDDYIRARSDVWFT
GPDGSLRSNRAFCQTAGLYACDMFIGSTLQIDLAGHSSTVTAERIAGFGGAPNMGSDARGRRHPSEPWLKAGAQADPDTP
AALRRGRKLVVQIGETFGDKNVPMFVEKLDALKLADKLQLDLAPIMVYGDDVTHIVTEEGIANLLMCRDKDEREHAIRGV
AGYTEVGRGRDRRMVERLRERGVIRRPEDLGIDPLDADRRWLAARSIKDLVHWSGGLYAPPARFRNW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60207; Mature: 60075

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGWNHARQARDARLAAGAAYVQGKRVDARDTVALLEAVLRPGDRVCLEGDNQKQADLLA
CCCCCHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH
TALADVDSAKIHDLHMVQSGVVLPEHLDVFERGIAKRLDFAYSGPQSQRIAKLLFGGKIA
HHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH
LGAVHTYLELFARYFIDLTPQVALIAAVSADRDGNLYTGPNTEDTPTVVEATAFKDGIVI
HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEECCCCCCCCCEEEEECCCCCEEE
AQVDRIVDKVPRVDIPGDRVHFVVEAGRPFYVEPLFTRDPAAITETQILTAMLAIKGIYE
EHHHHHHHHCCCCCCCCCCEEEEEECCCCEEECEECCCCCCHHHHHHHHHHHHHHHHCCC
PYGIKRLNHGIGFNTAAIELLLPTYGAKLGLKGKVCTHWALNPHPTLIPAIESGWVEQIH
CCCHHHHHCCCCCCHHHEEEEECCCCCCCCCCCCEEEEECCCCCCCEEECHHCCHHHHHH
CFGSEVGMDDYIRARSDVWFTGPDGSLRSNRAFCQTAGLYACDMFIGSTLQIDLAGHSST
HHCCCCCCHHHHHCCCCEEEECCCCCCCCCCHHHHHCCCEEEHHHHCCEEEEEECCCCCC
VTAERIAGFGGAPNMGSDARGRRHPSEPWLKAGAQADPDTPAALRRGRKLVVQIGETFGD
CCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCEEEEEEHHHCCC
KNVPMFVEKLDALKLADKLQLDLAPIMVYGDDVTHIVTEEGIANLLMCRDKDEREHAIRG
CCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
VAGYTEVGRGRDRRMVERLRERGVIRRPEDLGIDPLDADRRWLAARSIKDLVHWSGGLYA
HCCHHHHCCCCHHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PPARFRNW
CCHHHCCC
>Mature Secondary Structure 
TGWNHARQARDARLAAGAAYVQGKRVDARDTVALLEAVLRPGDRVCLEGDNQKQADLLA
CCCCHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH
TALADVDSAKIHDLHMVQSGVVLPEHLDVFERGIAKRLDFAYSGPQSQRIAKLLFGGKIA
HHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH
LGAVHTYLELFARYFIDLTPQVALIAAVSADRDGNLYTGPNTEDTPTVVEATAFKDGIVI
HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEECCCCCCCCCEEEEECCCCCEEE
AQVDRIVDKVPRVDIPGDRVHFVVEAGRPFYVEPLFTRDPAAITETQILTAMLAIKGIYE
EHHHHHHHHCCCCCCCCCCEEEEEECCCCEEECEECCCCCCHHHHHHHHHHHHHHHHCCC
PYGIKRLNHGIGFNTAAIELLLPTYGAKLGLKGKVCTHWALNPHPTLIPAIESGWVEQIH
CCCHHHHHCCCCCCHHHEEEEECCCCCCCCCCCCEEEEECCCCCCCEEECHHCCHHHHHH
CFGSEVGMDDYIRARSDVWFTGPDGSLRSNRAFCQTAGLYACDMFIGSTLQIDLAGHSST
HHCCCCCCHHHHHCCCCEEEECCCCCCCCCCHHHHHCCCEEEHHHHCCEEEEEECCCCCC
VTAERIAGFGGAPNMGSDARGRRHPSEPWLKAGAQADPDTPAALRRGRKLVVQIGETFGD
CCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCEEEEEEHHHCCC
KNVPMFVEKLDALKLADKLQLDLAPIMVYGDDVTHIVTEEGIANLLMCRDKDEREHAIRG
CCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
VAGYTEVGRGRDRRMVERLRERGVIRRPEDLGIDPLDADRRWLAARSIKDLVHWSGGLYA
HCCHHHHCCCCHHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PPARFRNW
CCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA