| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351181
Identifier: 115351181
GI number: 115351181
Start: 1237330
End: 1238007
Strand: Direct
Name: 115351181
Synonym: Bamb_1128
Alternate gene names: NA
Gene position: 1237330-1238007 (Clockwise)
Preceding gene: 115351180
Following gene: 115351182
Centisome position: 34.79
GC content: 69.47
Gene sequence:
>678_bases GTGTGCACTCACTACCGCGCCCCCGATGAAGACCCGGGCATCAGCGAGCTGAAGCTCGGCATCGGCGACCTGTTTCGCCG CGATCCGTGGGAACCCGACGTGTATCCCGACTACGTGGCGCCCATCGCGCGTGCCGACGGCGACGGCCTCGCGGTCGTCA GCGCGGTGTTCGGCTTCTGGCCGAAGTTCATGCAGCCCGTGCGTGTCGACGAGAACGGCCGCAAGCGCAAGAAGCTCGAT ACGGTGAACGCGCGCGCGGAAACGGTCGGCTCGTCGCGGCTCTACGGCACCGCCTGGCGCAACGGCCAGCGTTGCCTGAT TCCTGTGCGCTGGATTTTCGAGCCGTGTTACGAGACGGGCCGCAACGTGTGGCACCGGATCGGCGTCGACGGCTGGCAGC CGTGCTGCGTCGCCGGCATCTGGCGCAGCTTCGTCACCGCCGACGGCCGCGAGCGAATCGGCATGACGATGCTCACGGTC AACGCCGACGATCACCCCGTGTTCGCGCGCATGCATCGGCCCGGCGACGAGAAGCGGGGCGTCGTGATCCTGCGCCGCGA CGACTACGACGCATGGCTGCACGCGCGCGACGTCGAAGCCGTGCGGCGCTTGCTGACGCTCCTTCCCTCCGACGACCTGG TGGCCGAGCCCGAGCCGGCGTCGCCCGCCGGCACCTGA
Upstream 100 bases:
>100_bases CTTGCACACGCAAGACTGTTTCGTCATACCAACCGATTGCACAAACACGGCGTGCACGCTGACCTACGATGAAGACATCG CGTCCATCGTCTGCCGAACC
Downstream 100 bases:
>100_bases GCTTTCATTTCTCCTACGCGCGACCGGCGACTCCGCAGGTCGGACGCGTGCCGTTTTCCGACACGTTTCATAAATCGTCG AACACCCGGGAAATCACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MCTHYRAPDEDPGISELKLGIGDLFRRDPWEPDVYPDYVAPIARADGDGLAVVSAVFGFWPKFMQPVRVDENGRKRKKLD TVNARAETVGSSRLYGTAWRNGQRCLIPVRWIFEPCYETGRNVWHRIGVDGWQPCCVAGIWRSFVTADGRERIGMTMLTV NADDHPVFARMHRPGDEKRGVVILRRDDYDAWLHARDVEAVRRLLTLLPSDDLVAEPEPASPAGT
Sequences:
>Translated_225_residues MCTHYRAPDEDPGISELKLGIGDLFRRDPWEPDVYPDYVAPIARADGDGLAVVSAVFGFWPKFMQPVRVDENGRKRKKLD TVNARAETVGSSRLYGTAWRNGQRCLIPVRWIFEPCYETGRNVWHRIGVDGWQPCCVAGIWRSFVTADGRERIGMTMLTV NADDHPVFARMHRPGDEKRGVVILRRDDYDAWLHARDVEAVRRLLTLLPSDDLVAEPEPASPAGT >Mature_225_residues MCTHYRAPDEDPGISELKLGIGDLFRRDPWEPDVYPDYVAPIARADGDGLAVVSAVFGFWPKFMQPVRVDENGRKRKKLD TVNARAETVGSSRLYGTAWRNGQRCLIPVRWIFEPCYETGRNVWHRIGVDGWQPCCVAGIWRSFVTADGRERIGMTMLTV NADDHPVFARMHRPGDEKRGVVILRRDDYDAWLHARDVEAVRRLLTLLPSDDLVAEPEPASPAGT
Specific function: Unknown
COG id: COG2135
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25473; Mature: 25473
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTHYRAPDEDPGISELKLGIGDLFRRDPWEPDVYPDYVAPIARADGDGLAVVSAVFGFW CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH PKFMQPVRVDENGRKRKKLDTVNARAETVGSSRLYGTAWRNGQRCLIPVRWIFEPCYETG HHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEHHHHHHHHHHHH RNVWHRIGVDGWQPCCVAGIWRSFVTADGRERIGMTMLTVNADDHPVFARMHRPGDEKRG HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHCCEEEEEECCCCCCEEEEECCCCCCCCC VVILRRDDYDAWLHARDVEAVRRLLTLLPSDDLVAEPEPASPAGT EEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MCTHYRAPDEDPGISELKLGIGDLFRRDPWEPDVYPDYVAPIARADGDGLAVVSAVFGFW CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH PKFMQPVRVDENGRKRKKLDTVNARAETVGSSRLYGTAWRNGQRCLIPVRWIFEPCYETG HHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEHHHHHHHHHHHH RNVWHRIGVDGWQPCCVAGIWRSFVTADGRERIGMTMLTVNADDHPVFARMHRPGDEKRG HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHCCEEEEEECCCCCCEEEEECCCCCCCCC VVILRRDDYDAWLHARDVEAVRRLLTLLPSDDLVAEPEPASPAGT EEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA