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The map label for this gene is omp32 [H]

Identifier: 115351130

GI number: 115351130

Start: 1170662

End: 1171750

Strand: Direct

Name: omp32 [H]

Synonym: Bamb_1076

Alternate gene names: 115351130

Gene position: 1170662-1171750 (Clockwise)

Preceding gene: 115351129

Following gene: 115351131

Centisome position: 32.92

GC content: 70.06

Gene sequence:

>1089_bases
ATGAAAACCTTCCGCACGGCCGCGACGGCCGTTTCGTTCGCGGCCGCCGCCGCGTCGCCGGGCGCGCACGCGCAGAGCAG
CGTGACGCTGTACGGCATCGTCGACACGGGAATTCAGTACTACAACAACGCGGCGGGGGGCGGCGCAGTCGCCGGCATGC
CGTCGCTGACCGGTGAAGTGCCGTCGCGCTTCGGGTTGCGCGGCGTCGAGGATCTCGGCGGCGGCTATCGCGCGTTCTTC
GTGCTCGAGAACGGCTTCGCGCCGAACTCGGGGACGCTGAACTACGGCGGGCGCCTGTTCGGCAGGCAGGCGAACGTCGG
CATCGAGTCGCCGTACGGCGCGCTCACGCTGGGGCGGCAGATGAACATGTCGATGCGGGTGCTGCTCAACGCCGACGTGA
TCGGTCCGTCGATCCATTCGATGGCGAGCTTCGACAGCTACCTGCCGAACGCGCGCAGCGACAACGCGCTCGGATATCTC
GGCCGCTTCGGCGGCGTGACGCTCGGCGGCACCTACAGCACCGGGCGCGACGACGCGGGCCCGGCCGGCCCGTCGGCGAC
CCATTGCGCGGGCAACGTGGCGGGCGACCCGGTCGCCTGTCGCCAGTACACGATGATGGTGGCGTACGACGCGCCGCAGT
TCGGCGCGGCCGCCTCGTATGACGTGATGCACGGCGGCGCGGGCGCGTCGGCGCCGCTGTCGAGCCCCGGCTATACGGAC
ACGCGCACGATCGTCGACGCGTACGTGAAATTCGGCATCGCGAAACTCGGCGCGGGCTGGATCCGCCGCAACACGGCGGC
CGCGGCGCACAGCCAGTCGGACATCTTCTTCGCGGGCGGCACGGTCCAGGCAACGCCGGCGCTATCATTCGACGCACAGG
CGCTGCGCTACCTGCTGCGCGGCCGCTTCGACTCGAACCTGTTCGTCGCGCGGGCGAACTACAGCCTGTCGAAGCGTACG
ATGGTCTATACGTCCGTCGCCTACATGACGAACAGCGCACTCGGCACGTCGGCGGTGGCGGCCGGCGGCACCGTCGGCGC
CGGCCAGAACCAGGTCGGCGTGATGGCGGGCATCCAGCAGCGCTTCTGA

Upstream 100 bases:

>100_bases
CGCGACCTGAGCGATCCCAGCGTTCCCCACAAGACCTGCCGCGCCCGGTGCGTCGCAGGTCGATATCAAGCATAACTACA
CGACTGGTCTGGAGACTTCC

Downstream 100 bases:

>100_bases
GCGGGCGGCGCGCACCACGGAGACTCCGACAATGACGACCGATCTTCTCAGCGACGTGCTGACCGACCTGCGGGCCGATG
CGGTCGTCACCGGGCGCTTC

Product: outer membrane protein (porin)

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MKTFRTAATAVSFAAAAASPGAHAQSSVTLYGIVDTGIQYYNNAAGGGAVAGMPSLTGEVPSRFGLRGVEDLGGGYRAFF
VLENGFAPNSGTLNYGGRLFGRQANVGIESPYGALTLGRQMNMSMRVLLNADVIGPSIHSMASFDSYLPNARSDNALGYL
GRFGGVTLGGTYSTGRDDAGPAGPSATHCAGNVAGDPVACRQYTMMVAYDAPQFGAAASYDVMHGGAGASAPLSSPGYTD
TRTIVDAYVKFGIAKLGAGWIRRNTAAAAHSQSDIFFAGGTVQATPALSFDAQALRYLLRGRFDSNLFVARANYSLSKRT
MVYTSVAYMTNSALGTSAVAAGGTVGAGQNQVGVMAGIQQRF

Sequences:

>Translated_362_residues
MKTFRTAATAVSFAAAAASPGAHAQSSVTLYGIVDTGIQYYNNAAGGGAVAGMPSLTGEVPSRFGLRGVEDLGGGYRAFF
VLENGFAPNSGTLNYGGRLFGRQANVGIESPYGALTLGRQMNMSMRVLLNADVIGPSIHSMASFDSYLPNARSDNALGYL
GRFGGVTLGGTYSTGRDDAGPAGPSATHCAGNVAGDPVACRQYTMMVAYDAPQFGAAASYDVMHGGAGASAPLSSPGYTD
TRTIVDAYVKFGIAKLGAGWIRRNTAAAAHSQSDIFFAGGTVQATPALSFDAQALRYLLRGRFDSNLFVARANYSLSKRT
MVYTSVAYMTNSALGTSAVAAGGTVGAGQNQVGVMAGIQQRF
>Mature_362_residues
MKTFRTAATAVSFAAAAASPGAHAQSSVTLYGIVDTGIQYYNNAAGGGAVAGMPSLTGEVPSRFGLRGVEDLGGGYRAFF
VLENGFAPNSGTLNYGGRLFGRQANVGIESPYGALTLGRQMNMSMRVLLNADVIGPSIHSMASFDSYLPNARSDNALGYL
GRFGGVTLGGTYSTGRDDAGPAGPSATHCAGNVAGDPVACRQYTMMVAYDAPQFGAAASYDVMHGGAGASAPLSSPGYTD
TRTIVDAYVKFGIAKLGAGWIRRNTAAAAHSQSDIFFAGGTVQATPALSFDAQALRYLLRGRFDSNLFVARANYSLSKRT
MVYTSVAYMTNSALGTSAVAAGGTVGAGQNQVGVMAGIQQRF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37235; Mature: 37235

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFRTAATAVSFAAAAASPGAHAQSSVTLYGIVDTGIQYYNNAAGGGAVAGMPSLTGEV
CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCC
PSRFGLRGVEDLGGGYRAFFVLENGFAPNSGTLNYGGRLFGRQANVGIESPYGALTLGRQ
CHHCCCCCHHHCCCCEEEEEEEECCCCCCCCEECCCCEEECCCCCCCCCCCCCCEEECCC
MNMSMRVLLNADVIGPSIHSMASFDSYLPNARSDNALGYLGRFGGVTLGGTYSTGRDDAG
CCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCC
PAGPSATHCAGNVAGDPVACRQYTMMVAYDAPQFGAAASYDVMHGGAGASAPLSSPGYTD
CCCCCCCCCCCCCCCCCEEHEEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCH
TRTIVDAYVKFGIAKLGAGWIRRNTAAAAHSQSDIFFAGGTVQATPALSFDAQALRYLLR
HHHHHHHHHHHHHHHHCCHHHHCCCHHHCCCCCCEEEECCEEEECCCCCCCHHHHHHHHH
GRFDSNLFVARANYSLSKRTMVYTSVAYMTNSALGTSAVAAGGTVGAGQNQVGVMAGIQQ
CCCCCCEEEEECCCCCCCCEEEEEEEHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHHH
RF
CC
>Mature Secondary Structure
MKTFRTAATAVSFAAAAASPGAHAQSSVTLYGIVDTGIQYYNNAAGGGAVAGMPSLTGEV
CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCC
PSRFGLRGVEDLGGGYRAFFVLENGFAPNSGTLNYGGRLFGRQANVGIESPYGALTLGRQ
CHHCCCCCHHHCCCCEEEEEEEECCCCCCCCEECCCCEEECCCCCCCCCCCCCCEEECCC
MNMSMRVLLNADVIGPSIHSMASFDSYLPNARSDNALGYLGRFGGVTLGGTYSTGRDDAG
CCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCC
PAGPSATHCAGNVAGDPVACRQYTMMVAYDAPQFGAAASYDVMHGGAGASAPLSSPGYTD
CCCCCCCCCCCCCCCCCEEHEEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCH
TRTIVDAYVKFGIAKLGAGWIRRNTAAAAHSQSDIFFAGGTVQATPALSFDAQALRYLLR
HHHHHHHHHHHHHHHHCCHHHHCCCHHHCCCCCCEEEECCEEEECCCCCCCHHHHHHHHH
GRFDSNLFVARANYSLSKRTMVYTSVAYMTNSALGTSAVAAGGTVGAGQNQVGVMAGIQQ
CCCCCCEEEEECCCCCCCCEEEEEEEHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHHH
RF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]