| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is acpS
Identifier: 115351068
GI number: 115351068
Start: 1102682
End: 1103122
Strand: Direct
Name: acpS
Synonym: Bamb_1014
Alternate gene names: 115351068
Gene position: 1102682-1103122 (Clockwise)
Preceding gene: 115351067
Following gene: 115351069
Centisome position: 31.0
GC content: 70.52
Gene sequence:
>441_bases ATGGCGATCTACGGCATCGGCACCGACGTCGTCCAGATAAGCCGCATCGCGGCCGTGCTCGAGCGCACGGGCGGCCGGTT TGCCGAGAAGGTGCTGGGCCCCGACGAGCTGCGCGTGTTCCACGCGCGCCGCGCGCGCTCCGAGGCGCGCGGCATCGCGT TCCTCGCGACGCGCTTTTCCGCGAAGGAAGCGTTCTCGAAGGCGATCGGGCTCGGCATGCACTGGCCGATGACCTGGCGC GCACTGCAGACCCTCAACCAGCGCAGCGGCGAACCGTACGTCGTCGCATCGGGCGAGTTGGCCGACTGGCTCGCCGCGCG CGGCATCACCGCACGCGTGACGGTCAGCGACGAACGCGACTACGCGGTGTCGTTCGTGGTCACCGAGACCGACGCCGCGC CGCCGCCCGCACCCGCACCTGTTTCCCGAACCACTTCCTGA
Upstream 100 bases:
>100_bases TGTCGCAGCGCTGCACGGCGGCGCGCGCTGACGATGCATTTCCTCCGCGCGCGCTTCGCCCGCCACCCGGCATCGTCCGC GTATCACGGCGGGCGCTGAC
Downstream 100 bases:
>100_bases CGGACTTCCCGATTCGATGAAAACGACTCCCGGCCCGGTCATGCTCGACGTCGTCGGCACGGCCCTGTCGCGCGACGATG CGCGGCGCCTTGCCCATCCG
Product: 4'-phosphopantetheinyl transferase
Products: NA
Alternate protein names: Holo-ACP synthase; 4'-phosphopantetheinyl transferase AcpS [H]
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MAIYGIGTDVVQISRIAAVLERTGGRFAEKVLGPDELRVFHARRARSEARGIAFLATRFSAKEAFSKAIGLGMHWPMTWR ALQTLNQRSGEPYVVASGELADWLAARGITARVTVSDERDYAVSFVVTETDAAPPPAPAPVSRTTS
Sequences:
>Translated_146_residues MAIYGIGTDVVQISRIAAVLERTGGRFAEKVLGPDELRVFHARRARSEARGIAFLATRFSAKEAFSKAIGLGMHWPMTWR ALQTLNQRSGEPYVVASGELADWLAARGITARVTVSDERDYAVSFVVTETDAAPPPAPAPVSRTTS >Mature_145_residues AIYGIGTDVVQISRIAAVLERTGGRFAEKVLGPDELRVFHARRARSEARGIAFLATRFSAKEAFSKAIGLGMHWPMTWRA LQTLNQRSGEPYVVASGELADWLAARGITARVTVSDERDYAVSFVVTETDAAPPPAPAPVSRTTS
Specific function: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein [H]
COG id: COG0736
COG function: function code I; Phosphopantetheinyl transferase (holo-ACP synthase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the P-Pant transferase superfamily. AcpS family [H]
Homologues:
Organism=Escherichia coli, GI1788916, Length=131, Percent_Identity=35.8778625954198, Blast_Score=82, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008278 - InterPro: IPR002582 - InterPro: IPR004568 - ProDom: PD004282 [H]
Pfam domain/function: PF01648 ACPS [H]
EC number: =2.7.8.7 [H]
Molecular weight: Translated: 15817; Mature: 15686
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIYGIGTDVVQISRIAAVLERTGGRFAEKVLGPDELRVFHARRARSEARGIAFLATRFS CEEEECCHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEHHHHH AKEAFSKAIGLGMHWPMTWRALQTLNQRSGEPYVVASGELADWLAARGITARVTVSDERD HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHCCCEEEEEECCCCC YAVSFVVTETDAAPPPAPAPVSRTTS EEEEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure AIYGIGTDVVQISRIAAVLERTGGRFAEKVLGPDELRVFHARRARSEARGIAFLATRFS EEEECCHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEHHHHH AKEAFSKAIGLGMHWPMTWRALQTLNQRSGEPYVVASGELADWLAARGITARVTVSDERD HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHCCCEEEEEECCCCC YAVSFVVTETDAAPPPAPAPVSRTTS EEEEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA